| Protein: | NSE3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 303 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NSE3.
| Description | E-value | Query Range |
Subject Range |
|
|
182.0 | [0..25] | [303..12] |
|
|
150.0 | [0..23] | [302..16] |
|
|
123.0 | [0..1] | [301..1] |
|
|
66.0 | [0..27] | [280..39] |
|
|
55.0 | [0..27] | [286..56] |
|
Region A: Residues: [1-129] |
1 11 21 31 41 51
| | | | | |
1 MSSIDNDSDV DLTEDLAVAK IVKENPVARK MVRYILSRGE SQNSIITRNK LQSVIHEAAR 60
61 EENIAKPSFS KMFMDINAIL YNVYGFELQG LPSKNNMNAG GNGSNSNTNK SMPEPLGHRA 120
121 QKFILLNNV
|
| Detection Method: |  |
| Confidence: | 1.67 |
| Match: | |
| Description: | No description for 1dgsA was found. |
|
Region A: Residues: [130-303] |
1 11 21 31 41 51
| | | | | |
1 PHSKNFDDFK ILQSAHTYEE LIVTGEYIGD DIASGTSNTL ESKLSTDRDL VYKGVLSVIL 60
61 CIVFFSKNNI LHQELIKFLE TFGIPSDGSK IAILNITIED LIKSLEKREY IVRLEEKSDT 120
121 DGEVISYRIG RRTQAELGLE SLEKLVQEIM GLEKEQTKSL HDDIIKSIGD SYSI
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.399 | a.1.1 | Globin-like |
| View | Download | 0.383 | a.47.2 | t-snare proteins |
| View | Download | 0.383 | a.47.2 | t-snare proteins |
| View | Download | 0.368 | c.47.1 | Thioredoxin-like |
| View | Download | 0.345 | a.118.8 | TPR-like |
| View | Download | 0.345 | a.118.8 | TPR-like |
| View | Download | 0.334 | d.379.1 | Description not found. |
| View | Download | 0.220 | a.118.8 | TPR-like |
