| Protein: | TRS23 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 219 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TRS23.
| Description | E-value | Query Range |
Subject Range |
|
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2.0E-76 | [1..219] | [1..219] |
|
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2.0E-61 | [1..219] | [1..210] |
|
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2.0E-59 | [1..219] | [1..210] |
|
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3.0E-50 | [1..219] | [1..210] |
|
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2.0E-45 | [3..219] | [5..216] |
|
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1.0E-36 | [6..218] | [36..178] |
|
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2.0E-35 | [4..218] | [24..168] |
|
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8.0E-30 | [3..218] | [1..144] |
|
Region A: Residues: [1-74] |
1 11 21 31 41 51
| | | | | |
1 MAIETILVIN KSGGLIYQRN FTNDEQKLNS NEYLILASTL HGVFAIASQL TPKALQLTQQ 60
61 TNIENTIPYI PYVG
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.371 | 0.033 | ER to Golgi vesicle-mediated transport | a.64.1 | Saposin |
| View | Download | 0.380 | 0.011 | ER to Golgi vesicle-mediated transport | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.389 | 0.006 | ER to Golgi vesicle-mediated transport | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.365 | N/A | N/A | c.55.7 | Methylated DNA-protein cysteine methyltransferase domain |
| View | Download | 0.362 | N/A | N/A | a.29.4 | RecG, N-terminal domain |
| View | Download | 0.356 | N/A | N/A | a.30.2 | Homodimeric domain of signal transducing histidine kinase |
| View | Download | 0.354 | N/A | N/A | a.105.1 | FIS-like |
| View | Download | 0.333 | N/A | N/A | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.333 | N/A | N/A | d.212.1 | TolA/TonB C-terminal domain |
| View | Download | 0.330 | N/A | N/A | a.22.1 | Histone-fold |
| View | Download | 0.324 | N/A | N/A | a.22.1 | Histone-fold |
| View | Download | 0.323 | N/A | N/A | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.319 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.315 | N/A | N/A | a.139.1 | Type I dockerin domain |
| View | Download | 0.303 | N/A | N/A | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.289 | N/A | N/A | a.101.1 | Uteroglobin-like |
| View | Download | 0.282 | N/A | N/A | a.8.1 | Bacterial immunoglobulin/albumin-binding domains |
| View | Download | 0.277 | N/A | N/A | a.12.1 | Kix domain of CBP (creb binding protein) |
| View | Download | 0.274 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.260 | N/A | N/A | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.259 | N/A | N/A | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.254 | N/A | N/A | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
| View | Download | 0.251 | N/A | N/A | a.8.2 | Plasmid maintenance system epsilon/zeta, antidote epsilon subunit |
| View | Download | 0.249 | N/A | N/A | a.151.1 | Glutamyl tRNA-reductase dimerization domain |
| View | Download | 0.233 | N/A | N/A | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.213 | N/A | N/A | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.204 | N/A | N/A | b.1.2 | Fibronectin type III |
| View | Download | 0.204 | N/A | N/A | d.43.1 | Elongation factor Ts (EF-Ts), dimerisation domain |
|
Region A: Residues: [75-219] |
1 11 21 31 41 51
| | | | | |
1 MSSNRSDTRN GGGNNNKHTN NEKLGSFKGD DFFKEPFTNW NKSGLRQLCT DQFTMFIYQT 60
61 LTGLKFVAIS SSVMPQRQPT IATTDKPDRP KSTSNLAIQI ADNFLRKVYC LYSDYVMKDP 120
121 SYSMEMPIRS NLFDEKVKKM VENLQ
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.229 | 0.096 | ER to Golgi vesicle-mediated transport | d.32.1 | Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase |
| View | Download | 0.262 | 0.018 | ER to Golgi vesicle-mediated transport | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.260 | 0.018 | ER to Golgi vesicle-mediated transport | d.52.7 | Ribosome-binding factor A, RbfA |
| View | Download | 0.323 | N/A | N/A | d.16.1 | FAD-linked reductases, C-terminal domain |
| View | Download | 0.257 | N/A | N/A | f.21.2 | Fumarate reductase respiratory complex transmembrane subunits |
| View | Download | 0.213 | N/A | N/A | a.25.1 | Ferritin-like |
| View | Download | 0.213 | N/A | N/A | d.14.1 | Ribosomal protein S5 domain 2-like |
| View | Download | 0.206 | N/A | N/A | a.148.1 | Arp2/3 complex 21 kDa subunit ARPC3 |
| View | Download | 0.205 | N/A | N/A | d.131.1 | DNA clamp |
| View | Download | 0.204 | N/A | N/A | a.138.1 | Multiheme cytochromes |
