| Protein: | SPR28 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 423 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPR28.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [10..400] | [71..416] |
|
|
0.0 | [10..400] | [123..476] |
|
|
0.0 | [1..423] | [1..379] |
|
|
0.0 | [2..418] | [115..484] |
|
|
0.0 | [10..400] | [32..377] |
|
Region A: Residues: [1-246] |
1 11 21 31 41 51
| | | | | |
1 MFPMKDHSAL EQHTLSRDEL RRRKGYKKGL QLSILLLGEK GSGKSTFLNN LCGQDISLSD 60
61 GDYDDDDDKV TNNVTPENGN AIEDIDPGYK TAHLSPGLKL VTRRVYLNDE LGVPITLDII 120
121 LFPGCGDNVD NSQSSVVIKN YLDQQFANVL KEEVRIKRNT KETDGRPHVC LYFLKSTPRG 180
181 VKKFDIELMK TICDKVNLIP IIPKADGLTE TELNLHKDIV RQEISQNNIR VFDFKSDTLG 240
241 ETLALY
|
| Detection Method: |  |
| Confidence: | 10.79 |
| Match: | 1egaA |
| Description: | GTPase Era, N-terminal domain; GTPase Era C-terminal domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [247-351] |
1 11 21 31 41 51
| | | | | |
1 DMDIDSSSAK SKYDNDTKIK EISPFAIVCS KTFNKNSENR VEHIRTYEWG SLVVEDQNTS 60
61 DFIYLKAILL GSHLQELKDV TNNVLYENYR AKVLTEKKNN YDIPN
|
| Detection Method: | |
| Confidence: | 10.79 |
| Match: | 1egaA |
| Description: | GTPase Era, N-terminal domain; GTPase Era C-terminal domain |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [352-423] |
1 11 21 31 41 51
| | | | | |
1 YSYIDETSRG SVSNVSTRRN SASRTLGNPD TNDENAYQIH KEIDEKNRII EDYQRKIDLL 60
61 EKMLAAPHQN KV
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
