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View Structure Prediction Details

Protein: RRG1
Organism: Saccharomyces cerevisiae
Length: 365 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RRG1.

Description E-value Query
Range
Subject
Range
RRG1_YEAST - Required for respiratory growth protein 1, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 20...
RRG1 - Protein of unknown function, required for vacuolar acidification and mitochondrial genome maintenanc...
0.0 [1..365] [1..365]

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Predicted Domain #1
Region A:
Residues: [1-365]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQNFGKIPS HKSYVLSLYR TVLRNIPKCC HSYAFQYEIK KTLSIQLFKH KHDKSSWSVY  60
   61 TLLNEFSLLN NCLLEGKLQE IKNLMKPLKK MKKQLKTTKI LNSLTSLGDV KTNDPEEVRR 120
  121 FHVLSAYIKR KQDLGLLPAY IPKTYQHKLL LPLALNEHAC LKLFHIQQKL KNGPPSAGLS 180
  181 YTKEGRNQIW FVRSPINKGR QQSKKLGILI RKERKDSQKN IDNLNFCEIN AAWALHEAIW 240
  241 EEYLESKKII KVNLPKYLEY AANIPKSTKC NPSSQYQKVK EWVDPVREIM FELHSKSFQR 300
  301 VEYFNKYKEK LLKNGGQLAY FDKKSKEMYA KRLTLFRKMS KETLPYVTLF IEGRDLPSVL 360
  361 AKYGF

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Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle