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View Structure Prediction Details

Protein: YDR048C
Organism: Saccharomyces cerevisiae
Length: 104 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YDR048C.

Predicted Domain #1
Region A:
Residues: [1-104]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLLQLLAV WSQSSSISMN SEVAQTNQKY KDHSFLVSQS FYSPFVNSCY WKLVNRRADL  60
   61 LKILFLRRKG DMHSHLFSYT FIFYFLLFKI LSLHPFREPA KINI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.626 a.24.3 Cytochromes
View Download 0.626 a.24.3 Cytochromes
View Download 0.613 a.7.1 Spectrin repeat
View Download 0.613 a.7.1 Spectrin repeat
View Download 0.609 a.7.6 Ribosomal protein S20
View Download 0.585 a.80.1 DNA polymerase III clamp loader subunits, C-terminal domain
View Download 0.582 a.47.2 t-snare proteins
View Download 0.582 a.47.2 t-snare proteins
View Download 0.570 a.24.3 Cytochromes


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle