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View Structure Prediction Details

Protein: YDR042C
Organism: Saccharomyces cerevisiae
Length: 200 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YDR042C.

Description E-value Query
Range
Subject
Range
YDR042C - Putative protein of unknown function; expression is increased in ssu72-ts69 mutant
gi|190404987 - gi|190404987|gb|EDV08254.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
YD042_YEAST - Uncharacterized protein YDR042C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YDR042C ...
0.0 [1..200] [1..200]

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Predicted Domain #1
Region A:
Residues: [1-200]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQILYNQSL KISTLSTFQG LKFLKVLIFS IFQQLFYNPV IQLFGTKASI MESDSTTLLE  60
   61 SSWSTERNFL NMNSDSISAT KNVFILFFTI FRLAEYIVYK LSDQKYRLHT SLNVQHFRWN 120
  121 SKKNTNRKRT LSFSKAYLPR TNILPIFVAD GLKNRFSGPL PGKSLESFQK LNLLSDNNIK 180
  181 RYAVPGNKAV NTLLWQEQYS 

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Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle