| Protein: | RAD61 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 647 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RAD61.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..647] | [1..647] |
|
|
8.0E-81 | [75..310] | [108..335] |
|
Region A: Residues: [1-74] |
1 11 21 31 41 51
| | | | | |
1 MRAYGKRGPV LRTPFRSNKG LPSSSDVEFS DDDVNSVIPD VSSTISSSIA DHPIEGLLDE 60
61 PRKAQDSSSS FDGA
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.260 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.259 | a.4.1 | Homeodomain-like |
| View | Download | 0.337 | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.273 | a.64.1 | Saposin |
| View | Download | 0.236 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.218 | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
|
Region A: Residues: [75-354] |
1 11 21 31 41 51
| | | | | |
1 NEKPSSQLDS KRNDQNVKII TSSDTSMAFM KDEKLSAFNF LDGSKASKRK RRRTYQKHDA 60
61 NITSSIEPDV QDEDSITMHN EFESIRKIYN DINEFILKLP RADDDILNKM LENEMKMDDS 120
121 IENNSIRTSK DKKYGKFRTI LINKNKENEI MGEEVDQKAN TLSLNNADNS NAEKEGLTST 180
181 NHYNELKNMG DTIKYQDDIE FLLSNSKSND NTTVPINEYF KKLLNLSLMI INDEEFFQYA 240
241 KRYFKKEIIK LSFAQFRSDF PELILLQGYL LHKVSESQSD
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [355-647] |
1 11 21 31 41 51
| | | | | |
1 FPPSFDNFSI ELSKDDGKIR TKKNKHIKKL SHLNFEDFLR KTQFKTGLYY SLSLWEMHGN 60
61 LSLDIIKRIS ILASNKDLFS RHVKTFIPLL EKLITASEFC HMYIEQPEMF DSLISNLNNQ 120
121 FKDMLDDDSL IKILILLTNM EVHNYTLWKE ADMIFQSSMN TILESIHPLT DAKVDNILLH 180
181 LGLCLNICSR ENSRLKLDGK LWYDMKTIFV KMIRDGSDTE NRLVQGLFYL NFSFLIKQRK 240
241 ENSNLDPGEL NLLLVELEAF KSETSQFNEG ISNKIEIALN YLKSIYTSER ITI
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
