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View Structure Prediction Details

Protein: ADY3
Organism: Saccharomyces cerevisiae
Length: 790 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ADY3.

Description E-value Query
Range
Subject
Range
MYH4_PIG - Myosin-4 OS=Sus scrofa GN=MYH4 PE=2 SV=1
4.0E-97 [3..785] [837..1656]
MYSS_CYPCA - Myosin heavy chain, fast skeletal muscle OS=Cyprinus carpio PE=2 SV=2
7.0E-96 [3..785] [836..1655]
MYH2_BOVIN - Myosin-2 OS=Bos taurus GN=MYH2 PE=2 SV=1
2.0E-95 [4..788] [841..1662]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
8.0E-95 [3..785] [51..870]
gi|12053672 - gi|12053672|emb|CAC20413.1| beta-myosin heavy chain [Homo sapiens]
1.0E-94 [3..785] [835..1654]
MYSS_CHICK - Myosin heavy chain, skeletal muscle, adult OS=Gallus gallus PE=1 SV=4
1.0E-94 [3..788] [838..1660]

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Predicted Domain #1
Region A:
Residues: [1-347]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNHWLAFLNK PESLKEQNSD CDQQGEMRHV TDGTLTKSPE SKPFRERRSQ TWIDSEVPTS  60
   61 TEKSNVQESI SSDIISKLSN RRSRRNRSES WAGSEASSPS GNISTLENAT EKNTLKSPNK 120
  121 FLQRGGLPTV GIGSQALSPA GKPSTLGNVS PGKFTTYKVH NSIEVNRFSS TPTKLLTNPH 180
  181 KVAAISNDEH YVVSNESLEE NIEVAHLENV FRSSKTPDEE QSEYMKLGEI RLSSSSYGGS 240
  241 ISKENSLPKV LDELQSQNEE IKALRQKLEE KDDRIQELEE LNSMNDAKLQ RIEDLQKEFH 300
  301 NERKAASKRL NIVQDRFRKE IKKIREEKIT DFQNKNASKK EKNEVTS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 22.0
Match: 1i84S_
Description: Heavy meromyosin subfragment
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [348-498]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AKTKCKAFSQ RNILVSELYR KQKQILNLQQ ENDKFLKDIN ESNNSIVKLR SEVEILKSNL  60
   61 QLSQDENKKL HDNGSFYEKR LNDVYSYMQN LSLFEKDLGK FILEEMKCGH SPSMFQNGFA 120
  121 KLYPDFQDIK NLENMEQYKQ LKGKIELLEK N

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [499-554]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DRIRLEKIIS VFKLINERLH FMQQQHSHKI KYLQKEALTK EQQFRLEKRR WHDILN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.30103
Match: 2tmaA_
Description: Tropomyosin
Matching Structure (courtesy of the PDB):

Predicted Domain #4
Region A:
Residues: [555-637]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LKEENFQKLK SELKGKLILS EKIQKNAEDK LNDYMNEHQE IVEKLQNQAL IASRWSTQIQ  60
   61 ESENTHKKIT DELAGKQSEI LKL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.30103
Match: 2tmaA_
Description: Tropomyosin
Matching Structure (courtesy of the PDB):

Predicted Domain #5
Region A:
Residues: [638-699]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EETILSLKED VFQEKLNLKK LYGDPSTELN FETVGKSFPH ITKEKYDSLG LDILTDLTYV  60
   61 QS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.30103
Match: 2tmaA_
Description: Tropomyosin
Matching Structure (courtesy of the PDB):

Predicted Domain #6
Region A:
Residues: [700-790]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QNLIKNLLIV LDIPLKTFLK IVPTIVIQLR CELTLLTKFA NDLNLKVFGK QLDFKSRRKV  60
   61 AMNEFLNNHD IAEVKHPLEY DLQALFKYFF S

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 10.30103
Match: 2tmaA_
Description: Tropomyosin
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle