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View Structure Prediction Details

Protein: YDL228C
Organism: Saccharomyces cerevisiae
Length: 213 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YDL228C.

Description E-value Query
Range
Subject
Range
DHE2_ACHKL - NAD-specific glutamate dehydrogenase OS=Achlya klebsiana PE=3 SV=1
2.0E-53 [70..208] [496..634]
gi|10798847 - gi|10798847|gb|AAG23119.1| putative glutamate dehydrogenase [Haloferax mediterranei]
gi|10798847|gb|A... - putative glutamate dehydrogenase [Haloferax mediterranei]
5.0E-43 [64..213] [421..573]
gi|1165014 - gi|1165014|emb|CAA55170.1| LAC ORF [Drosophila auraria]
3.0E-41 [69..206] [65..202]
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
1.0E-32 [107..213] [2..108]

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Predicted Domain #1
Region A:
Residues: [1-213]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNAVLTRRHG LGDNSLQTNF SLSQFISRWV FDLQSSQSIG QSSFNLGLGT SLQFRRQDWV  60
   61 SDSLFDGGNV GFQSLSSFVL LGKSFIGSLE LFSLVNHLFN FFRRQSTNSV RDSDVRRLTG 120
  121 RLFDGSNLQD TVSINFEDSF QDWFTSWHHW DVLQVEFTQQ SVFFTVNTFT LVDWELNGGL 180
  181 VVSTCSKGSS LDGWNSSVSW NNDTEHVTLH TNT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle