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View Structure Prediction Details

Protein: FMP45
Organism: Saccharomyces cerevisiae
Length: 309 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FMP45.

Description E-value Query
Range
Subject
Range
FMP45 - Integral membrane protein localized to mitochondria (untagged protein); required for sporulation and...
FMP45_YEAST - SUR7 family protein FMP45 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=FMP45 PE=1 SV=...
gi|190405213 - gi|190405213|gb|EDV08480.1| integral membrane protein [Saccharomyces cerevisiae RM11-1a]
0.0 [1..309] [1..309]
gi|3850139 - gi|3850139|emb|CAA21940.1| potential membrane protein [Candida albicans]
SUR7_CANAL - Protein SUR7 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=SUR7 PE=1 SV=1
1.0E-96 [4..292] [2..268]

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Predicted Domain #1
Region A:
Residues: [1-309]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIFKRFVNLL VFLFLLGAGL LTFFLILSGG RESGTLKNFY WLQADTNGFN SAPSTTRWYN  60
   61 YNWCGYEDGQ LANCSSRAPA KPFSPRDNFG NSVNLPSSFR NNRDTYYYLS RVGWAMLLIS 120
  121 LFFIVLALVP GFLATFLPFK AVPVLYCVLS WLAFFFIILA ACLYTGCYVK ARKTFRNSGR 180
  181 SARLGPKNFA FIWTSVFLML VNAIWSTIFS ATHKAHSTYS DHDMYAQYES PSVDTGAQME 240
  241 KSTYNSGATD GAGPITAAPV VGQPQPTTTT TPAGNGKFFQ KLKTRKQVPS AELEPAGDGG 300
  301 LAGPVTVRD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle