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View Structure Prediction Details

Protein: YDL211C
Organism: Saccharomyces cerevisiae
Length: 372 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YDL211C.

Description E-value Query
Range
Subject
Range
YD211_YEAST - Uncharacterized protein YDL211C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YDL211C ...
YDL211C - Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to th...
0.0 [1..372] [1..372]

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Predicted Domain #1
Region A:
Residues: [1-278]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLLNVTSSQY ISTPQSRSLS EIDTSETASL SSATDHIFAL STEVVSSITT NLIEGLESSI  60
   61 QVPISTAYGT TSFRNNTSSP QYLVSNCTSS VQSNITIDRG LLSTLKTFTT SQVPTIEPST 120
  121 TKLTTPLSTT FTSTSTSEIY SVFTSENSVY IIYDQEYKFT ERSTTFNTHF PQTTVLQESN 180
  181 PPLTFTIPSN TITGDAKLYQ YLSGALNTQD TSDANNRRTG VIVGSTVGVV IGVVIVIFIG 240
  241 FIIIRNRRNV KNHSKKGFSH DIGKRVSCDE VTETEAPS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [279-372]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NPFLNVLNYK VTTNGEGKRD SFENGRDLHR ASSSDGIYIA HPYYGMADHE SGRFSYVSSY  60
   61 NESAESSIEE TSSSASTITR PNIQQTNSFL REII

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.401 b.82.3 cAMP-binding domain-like
View Download 0.302 d.129.1 TATA-box binding protein-like
View Download 0.270 d.82.2 Frataxin-like
View Download 0.315 g.44.1 RING/U-box


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle