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View Structure Prediction Details

Protein: YDL176W
Organism: Saccharomyces cerevisiae
Length: 708 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YDL176W.

Description E-value Query
Range
Subject
Range
gi|207347111 - gi|207347111|gb|EDZ73404.1| YDL176Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|151941829 - gi|151941829|gb|EDN60185.1| conserved protein [Saccharomyces cerevisiae YJM789]
YDL176W - Protein of unknown function, predicted by computational methods to be involved in fructose-1,6-bisph...
gi|190405172 - gi|190405172|gb|EDV08439.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
YD176_YEAST - Uncharacterized protein YDL176W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YDL176W ...
0.0 [1..708] [1..708]

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Predicted Domain #1
Region A:
Residues: [1-708]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATGRIQFAV STPCNTKGKP SGYRLFEFKN DRLALVPSER GCTKVDVNAN IQAFCYLRPN  60
   61 GRDTSISPDA THILDSCDYM VLAKSNGFIE IISNYQYKIK NGLRLAPSYI LRCTPEDFES 120
  121 NFFSDYMIAG LEYSQGLLYC CMCSGRIYVF VMNLPTDYIQ YKNMYNPMFP DCFFKVHHDN 180
  181 NTTHSSEEEK LFEGSTRYTG RSCSKHICYF LLPIEPSHLR SSPVVSSFCN MYQGLPIYRP 240
  241 SMYLHIERGI STFHINPLDR FCFMTVSPRS PLFIRKIILP LTYVTFLSTF ISLKNSIQGD 300
  301 TCGEILSWDN VAQQNGFGSL FSWISNKFTF DTDIINSTIW DDIVKYSGTG MLDSGIVWKQ 360
  361 RQGHAKDDIY ELFHTQDMLG SSRRNSSFST ASSEPRPLSR RRRESFQALT RDAFRERMDV 420
  421 PCSTKWELDS FIRGLRRNTF MVDFEIVEKI SHRNGNDGVN EDDNTTDESD ETMTSFLTDN 480
  481 YKKMDIVCID HFVTLSAFRP RYYDEPIIKI DSLSNKNGSE NGTNEEEWAE SQMKVDGQVI 540
  541 DDETAQFKQA LGNLCSFKKL FMLDDSLCFI LDTHGVLLIN RFEIKNTKNL LRNSKDTIRI 600
  601 IPHDFGLIND TIVIINDIDV GTDNVCALTF HLVVTSMAGE ITVLKGEFFK NCRLGRIKLC 660
  661 DSLKLNRKDR FVDKLALIDY DGLNAQKRRL DYDEKDLYTF IVKKVKRD

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle