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View Structure Prediction Details

Protein: YDL162C
Organism: Saccharomyces cerevisiae
Length: 118 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

No multiple sequence alignment data found for YDL162C.

Predicted Domain #1
Region A:
Residues: [1-118]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVLPLAPFP SDPGTHTNGS FFYFLKLLFV IERNFHHYPD DSLYVATISD NHTSKIKYFE  60
   61 QHKAPPTFRK TCNRNSYCSR WFYCCLTLSS FCSLRCVPPL EMADGIFHLN AKTRESEI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.471 a.1.1 Globin-like
View Download 0.469 a.121.1 Tetracyclin repressor-like, C-terminal domain
View Download 0.400 d.92.1 Metalloproteases ("zincins"), catalytic domain
View Download 0.385 a.1.1 Globin-like
View Download 0.369 d.92.1 Metalloproteases ("zincins"), catalytic domain
View Download 0.283 a.1.1 Globin-like
View Download 0.239 d.79.1 YjgF-like
View Download 0.223 a.61.1 Retroviral matrix proteins
View Download 0.216 a.121.1 Tetracyclin repressor-like, C-terminal domain


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle