| Protein: | RPC53 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 422 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RPC53.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..422] | [1..422] |
|
|
1.0E-79 | [184..421] | [159..394] |
|
|
4.0E-44 | [274..421] | [169..329] |
|
|
3.0E-34 | [296..422] | [151..262] |
|
|
6.0E-32 | [299..422] | [130..263] |
|
Region A: Residues: [1-232] |
1 11 21 31 41 51
| | | | | |
1 MSSNKGNGRL PSLKDSSSNG GGSAKPSLKF KPKAVARKSK EEREAAASKV KLEEESKRGN 60
61 DKKHFNNKNK RVTGAGGQQR RMAKYLNNTH VISSGPLAAG NFVSEKGDLR RGFIKSEGSG 120
121 SSLVQKGLET IDNGAESSEN EAEDDDNEGV ASKSKKKFNM GKEFEARNLI EDEDDGESEK 180
181 SSDVDMDDEE WRSKRIEQLF PVRPVRVRHE DVETVKREIQ EALSEKPTRE PT
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [233-422] |
1 11 21 31 41 51
| | | | | |
1 PSVKTEPVGT GLQSYLEERE RQVNEKLADL GLEKEFQSVD GKEAAAELEL LNADHQHILR 60
61 KLKKMNNKPE RFMVFQLPTR LPAFERPAVK EEKEDMETQA SDPSKKKKNI KKKDTKDALS 120
121 TRELAGKVGS IRVHKSGKLS VKIGNVVMDI GKGAETTFLQ DVIALSIADD ASSAELLGRV 180
181 DGKIVVTPQI
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
