YRC Public Data Repository - Protein Structure Prediction

Protein:	STF1
Organism:	Saccharomyces cerevisiae
Length:	86 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for STF1.

Description	E-value	Query Range	Subject Range
STF1_YEAST - ATPase-stabilizing factor 9 kDa, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S28... gi\|190405133 - gi\|190405133\|gb\|EDV08400.1\| ATPase-stabilizing factor 9 kDa, mitochondrial precursor [Saccharomyces ... STF1 - Protein involved in regulation of the mitochondrial F1F0-ATP synthase; Stf1p and Stf2p may act as st... gi\|151941872 - gi\|151941872\|gb\|EDN60228.1\| stabilizing factor [Saccharomyces cerevisiae YJM789]	2.0E-30	[1..86]	[1..86]
ATIF_SCHPO - Putative ATPase inhibitor, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=i... SPCC70.02c - mitochondrial ATPase inhibitor	4.0E-18	[16..86]	[17..87]
gi\|447739 - gi\|447739\|prf\|\|1915304A nylB upstream ORF	5.0E-17	[24..86]	[1..63]
ATIF_CYBJA - ATPase inhibitor, mitochondrial OS=Cyberlindnera jadinii PE=1 SV=1	1.0E-12	[26..78]	[3..55]

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Predicted Domain #1

Region A:
Residues: [1-86]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNRCISRNT RLPVNLRIAS RFYSDGPLGG AGPGNPQDIF IKRERAKEDY YARQQEREQL  60
   61 AHVKEQLKEH KKKLENLENK INNLSK

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits