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View Structure Prediction Details

Protein: YDL129W
Organism: Saccharomyces cerevisiae
Length: 291 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YDL129W.

Description E-value Query
Range
Subject
Range
YD129_YEAST - Uncharacterized protein YDL129W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YDL129W ...
YDL129W - Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to th...
0.0 [1..291] [1..291]

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Predicted Domain #1
Region A:
Residues: [1-291]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELRSRRSAE AYLVTPEEPA KNKSERSIES NERVGTREAK SENTSVFSPA YSDTATTDSS  60
   61 KKVDDNEYYN FTSHFMPSLK NTRELENTIL NLIQRIKEGD DETLVSEKDL ILSVLNRSLA 120
  121 STSHWKLQAQ LSELRATSEG RYAVETNLLK KEVEFLKNKT PKTNESASSA ELRPLLERPL 180
  181 KRKLSLPGLA QRPLSTGARL EGGYGGVSPN SWKTKVPKLP LPASRPSLNL SPQKVPTGTD 240
  241 KVEEDTKIDT LELVENNKPH PRMRRRSDNP ATNEYVRVFH LEKKEPKSRK K

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle