| Protein: | ASM4 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 528 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ASM4.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..528] | [1..528] |
|
|
6.0E-5 | [267..425] | [168..284] |
|
|
5.0E-4 | [4..218] | [651..833] |
|
Region A: Residues: [1-226] |
1 11 21 31 41 51
| | | | | |
1 MFGIRSGNNN GGFTNLTSQA PQTTQMFQSQ SQLQPQPQPQ PQQQQQHLQF NGSSDASSLR 60
61 FGNSLSNTVN ANNYSSNIGN NSINNNNIKN GTNNISQHGQ GNNPSWVNNP KKRFTPHTVI 120
121 RRKTTKQNSS SDINQNDDSS SMNATMRNFS KQNQDSKHNE RNKSAANNDI NSLLSNFNDI 180
181 PPSVTLQDWQ REDEFGSIPS LTTQFVTDKY TAKKTNRSAY DSKNTP
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [227-425] |
1 11 21 31 41 51
| | | | | |
1 NVFDKDSYVR IANIEQNHLD NNYNTAETNN KVHETSSKSS SLSAIIVFGY PESISNELIE 60
61 HFSHFGHIME DFQVLRLGRG INPNTFRIFH NHDTGCDEND STVNKSITLK GRNNESNNKK 120
121 YPIFTGESWV KLTYNSPSSA LRALQENGTI FRGSLIGCIP YSKNAVEQLA GCKIDNVDDI 180
181 GEFNVSMYQN SSTSSTSNT
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [426-528] |
1 11 21 31 41 51
| | | | | |
1 PSPPNVIITD GTLLREDDNT PAGHAGNPTN ISSPIVANSP NKRLDVIDGK LPFMQNAGPN 60
61 SNIPNLLRNL ESKMRQQEAK YRNNEPAGFT HKLSNWLFGW NDL
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.337 | a.1.1 | Globin-like |
| View | Download | 0.440 | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
| View | Download | 0.283 | a.7.5 | Tubulin chaperone cofactor A |
| View | Download | 0.304 | a.142.1 | PTS-regulatory domain, PRD |
| View | Download | 0.440 | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
| View | Download | 0.337 | a.1.1 | Globin-like |
| View | Download | 0.314 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.314 | a.121.1 | Tetracyclin repressor-like, C-terminal domain |
| View | Download | 0.304 | a.142.1 | PTS-regulatory domain, PRD |
| View | Download | 0.283 | a.7.5 | Tubulin chaperone cofactor A |
| View | Download | 0.249 | a.7.8 | GAT domain |
| View | Download | 0.246 | a.60.10 | Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain |
| View | Download | 0.245 | a.24.7 | FKBP12-rapamycin-binding domain of FKBP-rapamycin-associated protein (FRAP) |
| View | Download | 0.240 | b.1.2 | Fibronectin type III |
| View | Download | 0.239 | a.24.17 | Group V grass pollen allergen |
| View | Download | 0.227 | a.118.1 | ARM repeat |
| View | Download | 0.223 | d.13.1 | HIT-like |
| View | Download | 0.221 | a.75.1 | Ribosomal protein S7 |
| View | Download | 0.220 | d.129.1 | TATA-box binding protein-like |
| View | Download | 0.216 | a.46.1 | Methionine synthase domain |
| View | Download | 0.213 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.213 | a.29.2 | Bromodomain |
| View | Download | 0.212 | a.52.1 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin |
| View | Download | 0.209 | a.1.1 | Globin-like |
| View | Download | 0.205 | d.54.1 | Enolase N-terminal domain-like |
| View | Download | 0.201 | a.100.1 | 6-phosphogluconate dehydrogenase C-terminal domain-like |
