Protein: | RPP1A |
Organism: | Saccharomyces cerevisiae |
Length: | 106 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RPP1A.
Description | E-value | Query Range |
Subject Range |
|
114.0 | [0..2] | [106..3] |
|
105.0 | [0..3] | [106..5] |
|
101.0 | [0..3] | [106..5] |
|
100.0 | [0..3] | [106..140] |
|
99.0 | [0..5] | [106..1] |
|
98.0 | [0..1] | [106..1] |
|
98.0 | [0..2] | [106..6] |
|
98.0 | [0..5] | [106..1] |
|
98.0 | [0..1] | [106..154] |
|
97.0 | [0..2] | [106..4] |
Region A: Residues: [1-106] |
1 11 21 31 41 51 | | | | | | 1 MSTESALSYA ALILADSEIE ISSEKLLTLT NAANVPVENI WADIFAKALD GQNLKDLLVN 60 61 FSAGAAAPAG VAGGVAGGEA GEAEAEKEEE EAKEESDDDM GFGLFD |
Detection Method: | |
Confidence: | 34.036212 |
Match: | PF00428.10 |
Description: | No description for PF00428.10 was found. |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.414 | N/A | N/A | a.144.2 | Ribosomal protein L20 |
View | Download | 0.386 | N/A | N/A | d.79.5 | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF |
View | Download | 0.310 | N/A | N/A | a.39.1 | EF-hand |
View | Download | 0.300 | N/A | N/A | a.144.2 | Ribosomal protein L20 |
View | Download | 0.277 | N/A | N/A | d.79.5 | 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF |