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View Structure Prediction Details

Protein: YDL073W
Organism: Saccharomyces cerevisiae
Length: 984 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YDL073W.

Description E-value Query
Range
Subject
Range
YD073_YEAST - UPF0592 protein YDL073W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YDL073W PE=1 SV=...
YDL073W - Putative protein of unknown function; YDL073W is not an essential gene
0.0 [1..984] [1..984]

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Predicted Domain #1
Region A:
Residues: [1-984]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGPAIHNQLY ECGLKTTSQD GFLMDNYETQ LFQSLNRFIN FINNANQSAS NKEQNTKFCK  60
   61 SSSNFLRLKL LTVLRQWCDS SRSNCTLEVR DVLTQWWVTL LNFLNSDTSL QIDTALELSL 120
  121 SIELTSVCLE CLSKIMTILI ILPFHSSRDM EIYSHHLLLT IHCITNKLIL ISKNSKKLKR 180
  181 TNSDDKCSIN DKKLQYLNKY SSLLRAFIGK LNAYAFFYLP EDFHFDTILL LTVSPQISSS 240
  241 IQTSLFSWKK RQYKFTDDQG QMIRTEAFEN KDTKFFKIIV SYIKNDFVLM SFYWHYWYII 300
  301 LQFMKFSDSD VGIKKSTLSC IPGSEILLTH VTTRFLNSDL NKFTRIIKQT PNPRIANENV 360
  361 TESHPNFKSL NSSNALITSE RINDYVFSNF KTIKLWECLR SLSGCILKEN HPEYLENMLS 420
  421 LHESLLIDYV STISAYDYIA ANVIYNKVLQ FIIFQFESLP SLKFIQWRSW YNGLLSMLRT 480
  481 KNVNCQTVSL LCLFNIWKHV TIEDRDEIVK VLLSDFWESL IFENEFPLIR ILFMKVLVFK 540
  541 IIPSVQNSSS LRFLPHDRIK QLYEELLVNK EELFEMQKHD SNDIVAHRKN ALVFNGNSRL 600
  601 MMIPKKPNTE DHLVYKINHD KNLTTERFPS VSSVANTRPN VILKNGKYAY DILDEMTSKA 660
  661 AFLLAEKKTR LNPKKNHKIM DGYEGGQENE DNDEDSEDSG SHKNKRKEGN SSLSATLNTW 720
  721 LSKFSSTSED SQKKKEQANE LGNDFEYDED VADFAEILPK QSSSNIEKIF KHGNNSGSMV 780
  781 SYNSSIKLNR RENILIGPPE LRFSNEIKEH NSIATIFKLV FIQTNRRVVE KIDLANMKWG 840
  841 TIHGGSKYMK PLPVPKDLVA SVAKNESETR NLATLCGNGL DFEIPVPDFN IFGKCMEDEQ 900
  901 DVAKIGNQNV EDLKVTGGRE VTIWKQIQDM KLRTRIQKIC VLIETFNATV REYFEFSNRL 960
  961 EHDGIFIDFE VRKPSSNNSI NIKV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle