| Protein: | STP4 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 490 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for STP4.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [9..490] | [270..793] |
|
|
0.0 | [9..490] | [274..820] |
|
|
0.0 | [12..488] | [130..648] |
|
Region A: Residues: [1-125] |
1 11 21 31 41 51
| | | | | |
1 MLVSSSFASS IDSVMSHETM SLRRNPPFID TPEKMPNPTA SPNGTIHHLI DPSLPLLSST 60
61 TSSSRSTLSS TLNSPPPPPL TTSYSSYNSS ACQSITSSPT DNTALAHNSK CYFPHSLSPT 120
121 PLSSN
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.203 | 0.739 | nucleus | a.4.1 | Homeodomain-like |
| View | Download | 0.249 | 0.426 | mitochondrion | a.1.1 | Globin-like |
| View | Download | 0.212 | 0.055 | cytoplasm | a.118.9 | ENTH/VHS domain |
| View | Download | 0.212 | 0.017 | nucleus | a.25.1 | Ferritin-like |
| View | Download | 0.322 | 0.001 | mitochondrion | a.80.1 | DNA polymerase III clamp loader subunits, C-terminal domain |
| View | Download | 0.307 | 0.001 | mitochondrion | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.214 | 0.000 | mitochondrion | a.81.1 | N-terminal domain of DnaB helicase |
|
Region A: Residues: [126-237] |
1 11 21 31 41 51
| | | | | |
1 SSSHVILPPI SSFTNLITVA EREFNGRSNS LHANFTSPVP RTVLDHHRHE LTFCNPNNTT 60
61 GFKTITPSPP TQHQSILPTA VDNVPRSKSV SSLPVSGFPP LIVKQQQQQQ LN
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.277 | 0.832 | mitochondrion | a.24.3 | Cytochromes |
| View | Download | 0.296 | 0.001 | mitochondrion | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.247 | 0.000 | mitochondrion | a.39.2 | Insect pheromon/odorant-binding proteins |
| View | Download | 0.251 | 0.000 | mitochondrion | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.227 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.220 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.211 | N/A | N/A | a.24.9 | alpha-catenin/vinculin |
|
Region A: Residues: [238-351] |
1 11 21 31 41 51
| | | | | |
1 SSSSASALPS IHSPLTNEHT SRYSSSLKDS AKITKQRKKK ECPICHNFYA NLSTHKSTHL 60
61 TPEDRPHKCP ICQRGFARNN DLIRHKKRHW KDEFMQIYAR ESDNNSGADD QDDT
|
| Detection Method: | |
| Confidence: | 26.39794 |
| Match: | 1meyC_ |
| Description: | Designed zinc finger protein |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [352-490] |
1 11 21 31 41 51
| | | | | |
1 ARTSANNDSD DSNDKLAASS SSEETKLLKK NQLKSLYKIK GAFKCPYNST LINLDMEVYP 60
61 HKSRSLYFEP INCHQTGVFS RCDTFKNHLK ALHFEYPPKT KKEDRGVVPG KCKHCGLQFP 120
121 NVDVWLNKHV GKGCGYSYH
|
| Detection Method: | |
| Confidence: | 44.9897 |
| Match: | 1a1fA_ |
| Description: | ZIF268 |
Matching Structure (courtesy of the PDB): |
|
