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View Structure Prediction Details

Protein: MTF2
Organism: Saccharomyces cerevisiae
Length: 440 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MTF2.

Description E-value Query
Range
Subject
Range
MTF2 - Mitochondrial matrix protein that interacts with an N-terminal region of mitochondrial RNA polymeras...
MTF2_YEAST - Mitochondrial transcription factor 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MTF...
gi|190405054 - gi|190405054|gb|EDV08321.1| protein NAM1, mitochondrial precursor [Saccharomyces cerevisiae RM11-1a]
0.0 [1..440] [1..440]

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Predicted Domain #1
Region A:
Residues: [1-440]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIRTSSILKN CNYRYIHCIH RCLLNEANLK DRKTHNVERV SNEKTFEQAL EEERKVFGEL  60
   61 FEAGARVENM RHTNASKIID KYYNGLQDNS EGTSVKKEKI VFNHSQRAQR KLPNKDHEFL 120
  121 KETAGNDYVY ERAEPSAIST KTISEQTRTL LEKIFDEDNS INKSNRELLN LNLRKGSGME 180
  181 ALRQPVAHSN VKFSEEVMQE IGNKIRYQTT LDQVLEPHID YLREAVKSDY DLLRYLKQSL 240
  241 DIYKKRNKDL ELKMNAESSN IFEDIRSACI NKPAELPKPL AMTLPYIIVK SLRLGDFDFP 300
  301 ADRKYTLISY VYNECKNNMD ASLYLTICNV DFYNLLVQLL WENFQEIRYL RRVVTEMSVN 360
  361 GVIGNIETVD ILDKIVKEMR SLNEDVFLEA GEQLSADEEV SSSANKIVNV GVLWNKDTNN 420
  421 DLLIVENYLK SLKKNLTRDR 

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle