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View Structure Prediction Details

Protein: NAT1
Organism: Saccharomyces cerevisiae
Length: 854 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NAT1.

Description E-value Query
Range
Subject
Range
NAT1_YEAST - N-terminal acetyltransferase A complex subunit NAT1 OS=Saccharomyces cerevisiae (strain ATCC 204508 ...
NAT1 - Subunit of the N-terminal acetyltransferase NatA (Nat1p, Ard1p, Nat5p); N-terminally acetylates many...
0.0 [1..854] [1..854]
NAA16_MOUSE - N-alpha-acetyltransferase 16, NatA auxiliary subunit OS=Mus musculus GN=Naa16 PE=2 SV=1
0.0 [17..795] [7..753]
NAA15 - N(alpha)-acetyltransferase 15, NatA auxiliary subunit
0.0 [17..795] [7..754]
gi|148234261, gi... - gi|9651963|gb|AAF91333.1|AF247679_1 putative N-terminal acetyltransferase [Xenopus laevis], gi|14823...
0.0 [17..795] [7..735]
FBpp0311887, Nat1-PA - The gene Nat1 is referred to in FlyBase by the symbol Dmel\Nat1 (CG12202, FBgn0031020). It is a prot...
2.0E-96 [17..786] [8..754]
gi|26451312, gi|... - gi|26451312|dbj|BAC42757.1| putative N-terminal acetyltransferase [Arabidopsis thaliana], gi|2233077...
9.0E-96 [17..756] [6..712]
OGT1_RAT - UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110 kDa subunit OS=Rattus norvegicu...
2.0E-85 [2..522] [27..530]

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Predicted Domain #1
Region A:
Residues: [1-173]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRKRSTKPK PAAKIALKKE NDQFLEALKL YEGKQYKKSL KLLDAILKKD GSHVDSLALK  60
   61 GLDLYSVGEK DDAASYVANA IRKIEGASAS PICCHVLGIY MRNTKEYKES IKWFTAALNN 120
  121 GSTNKQIYRD LATLQSQIGD FKNALVSRKK YWEAFLGYRA NWTSLAVAQD VNG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 28.0
Match: 1fchA_
Description: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor)
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [174-255]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ERQQAINTLS QFEKLAEGKI SDSEKYEHSE CLMYKNDIMY KAASDNQDKL QNVLKHLNDI  60
   61 EPCVFDKFGL LERKATIYMK LG

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 28.0
Match: 1fchA_
Description: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor)
Matching Structure (courtesy of the PDB):

Predicted Domain #3
Region A:
Residues: [256-342]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QLKDASIVYR TLIKRNPDNF KYYKLLEVSL GIQGDNKLKK ALYGKLEQFY PRCEPPKFIP  60
   61 LTFLQDKEEL SKKLREYVLP QLERGVP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 28.0
Match: 1fchA_
Description: Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor)
Matching Structure (courtesy of the PDB):

Predicted Domain #4
Region A:
Residues: [343-513]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ATFSNVKPLY QRRKSKVSPL LEKIVLDYLS GLDPTQDPIP FIWTNYYLSQ HFLFLKDFPK  60
   61 AQEYIDAALD HTPTLVEFYI LKARILKHLG LMDTAAGILE EGRQLDLQDR FINCKTVKYF 120
  121 LRANNIDKAV EVASLFTKND DSVNGIKDLH LVEASWFIVE QAEAYYRLYL D

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.945 0.330 protein amino acid acetylation a.118.8 TPR-like

Predicted Domain #5
Region A:
Residues: [514-579]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RKKKLDDLAS LKKEVESDKS EQIANDIKEN QWLVRKYKGL ALKRFNAIPK FYKQFEDDQL  60
   61 DFHSYC

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [580-854]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKGTPRAYL EMLEWGKALY TKPMYVRAMK EASKLYFQMH DDRLKRKSDS LDENSDEIQN  60
   61 NGQNSSSQKK KAKKEAAAMN KRKETEAKSV AAYPSDQDND VFGEKLIETS TPMEDFATEF 120
  121 YNNYSMQVRE DERDYILDFE FNYRIGKLAL CFASLNKFAK RFGTTSGLFG SMAIVLLHAT 180
  181 RNDTPFDPIL KKVVTKSLEK EYSENFPLNE ISNNSFDWLN FYQEKFGKND INGLLFLYRY 240
  241 RDDVPIGSSN LKEMIISSLS PLEPHSQNEI LQYYL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle