| Protein: | MED2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 431 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MED2.
| Description | E-value | Query Range |
Subject Range |
|
|
176.0 | [0..69] | [430..2088] |
|
|
169.0 | [0..40] | [430..860] |
|
|
137.0 | [0..82] | [396..42] |
|
Region A: Residues: [1-132] |
1 11 21 31 41 51
| | | | | |
1 MVVQNSPVSS VHTANFSERG SNTRTMTYKN KLTVCFDDIL KVGAEMMMQQ QLKNVQLDSY 60
61 LVNGFSQSQQ KLLKEKVKLF HGILDDLETS LSQSSSYLET LTALGKEKEK EREEAEKKRA 120
121 EQENMRKVRE QE
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.831 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.747 | a.29.6 | Description not found. |
| View | Download | 0.746 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.732 | a.29.6 | Description not found. |
| View | Download | 0.728 | a.24.9 | alpha-catenin/vinculin |
| View | Download | 0.693 | a.24.14 | FAT domain of focal adhesion kinase |
| View | Download | 0.672 | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.642 | a.7.7 | BAG domain |
| View | Download | 0.634 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.530 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
|
Region A: Residues: [133-206] |
1 11 21 31 41 51
| | | | | |
1 ELKKRQELEE ASQQQQLQQN SKEKNGLGLN FSTTAPANTT DANGSKENYQ ELGSLQSSSQ 60
61 TQLENANAAN NGAA
|
| Detection Method: | |
| Confidence: | 11.93 |
| Match: | |
| Description: | No description for 1l8mA was found. |
|
Region A: Residues: [207-286] |
1 11 21 31 41 51
| | | | | |
1 FSPLTTTRIQ SQQAQPSDVM FNDLNSMDIS MFSGLDSTGF DSTAFNATVD ETKGFDDNDS 60
61 GNNYNDINIS SIENNINNNI
|
| Detection Method: | |
| Confidence: | 11.93 |
| Match: | |
| Description: | No description for 1l8mA was found. |
|
Region A: Residues: [287-356] |
1 11 21 31 41 51
| | | | | |
1 NSTKNGKDNN NESNKNNNGD EKNKNNNEDN ENNNNSSEKN NNNNNNNNNN NDDNGNNNNN 60
61 NSGNDNNNTT
|
| Detection Method: | |
| Confidence: | 11.93 |
| Match: | |
| Description: | No description for 1l8mA was found. |
|
Region A: Residues: [357-431] |
1 11 21 31 41 51
| | | | | |
1 NNDSNNKNNS ITTGNDNENI VNNDLPTTVV SNPGDNPPPA DNGEEYLTLN DFNDLNIDWS 60
61 TTGDNGELDL SGFNI
|
| Detection Method: | |
| Confidence: | 11.93 |
| Match: | |
| Description: | No description for 1l8mA was found. |
