YRC Public Data Repository - Protein Structure Prediction

Protein:	YCR101C
Organism:	Saccharomyces cerevisiae
Length:	182 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YCR101C.

Description	E-value	Query Range	Subject Range
gi\|190406518 - gi\|190406518\|gb\|EDV09785.1\| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a] YCZ1_YEAST - Uncharacterized protein YCR101C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCR101C ... YCR101C - Putative protein of unknown function; localizes to the membrane fraction; YCR101C is not an essentia...	4.0E-82	[1..182]	[1..182]

Back

Predicted Domain #1

Region A:
Residues: [1-182]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILLHAIYTL WVIILLPLLN AEKFVPKVTE APIETSFNLV SFDDSNTSIR LDGWGVVWIS  60
   61 FDAGENWETV KEIEERIFRF TVDPFHGQER GFAFICESPK FYITDDRGES WRALTIPSSE 120
  121 EYLDGDCFIT THPRNKELLI ANCYSYMIDA DVLYDPSEIY LSNDGNPFLK LNLPWKRKKT 180
  181 TI

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits