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View Structure Prediction Details

Protein: YCR100C
Organism: Saccharomyces cerevisiae
Length: 316 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YCR100C.

Description E-value Query
Range
Subject
Range
YCZ0_YEAST - Uncharacterized protein YCR100C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCR100C ...
YCR100C - Putative protein of unknown function
0.0 [1..316] [1..316]
gi|189442825 - gi|189442825|gb|AAI67251.1| Sortilin-related VPS10 domain containing receptor 3 [synthetic construct...
SORC3_MOUSE - VPS10 domain-containing receptor SorCS3 OS=Mus musculus GN=Sorcs3 PE=1 SV=1
6.0E-99 [5..314] [409..700]
gi|18032275 - gi|18032275|gb|AAL56667.1|AF284756_1 VPS10 domain receptor SorCS [Homo sapiens]
3.0E-97 [6..306] [390..668]

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Predicted Domain #1
Region A:
Residues: [1-108]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSTDIWISN DASTFQKAQL PTQLRHVKVI KIREDSIGRI ILLISTEITN EENADPDLSE  60
   61 IFISDSQGLK FSPVEWTPNH QFGNFRLTFP DFLKGTIFGS FHPSIDYS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [109-316]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NHQVNYTENI AGGETKISVD NGLTWSNLKV VDEENADSFG CDITRPERCS LQGYFYNLKL  60
   61 SNPSAGIILM TGSVGDDNEF DRKDRKTFIS RDGGLTWRVA HNSSGLYATG DLGNIIVYIP 120
  121 SPSYKDGDVQ SKLYFSLDQG RTWNQYELVD ALFYIHPLEL INTTPDGSGS KFILSGHLIT 180
  181 TASQEGNNTN ISYIARSVLY AIDFSAAF

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle