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View Structure Prediction Details

Protein: FIG2
Organism: Saccharomyces cerevisiae
Length: 1609 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FIG2.

Description E-value Query
Range
Subject
Range
SPBPJ4664.02 - glycoprotein
YHU2_SCHPO - Uncharacterized threonine-rich GPI-anchored glycoprotein PJ4664.02 OS=Schizosaccharomyces pombe (str...
605.0 [0..15] [1606..763]
gi|39592304, gi|... - gi|39592304|emb|CAE75525.1| Hypothetical protein CBG23547 [Caenorhabditis briggsae], gi|187020927|em...
gi|157762282 - gi|157762282|ref|XP_001673483.1| Hypothetical protein CBG23547 [Caenorhabditis briggsae AF16]
518.0 [0..4] [1605..331]
MUC17 - mucin 17, cell surface associated
408.0 [0..2] [1601..795]
gi|10952736 - gi|10952736|gb|AAG25054.1| agglutinin-like protein [Candida albicans]
403.0 [0..36] [1515..12]

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Predicted Domain #1
Region A:
Residues: [1-174]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSFASLGLI YSVVNLLTRV EAQIVFYQNS STSLPVPTLV STSIADFHES SSTGEVQYSS  60
   61 SYSYVQPSID SFTSSSFLTS FEAPTETSSS YAVSSSLITS DTFSSYSDIF DEETSSLIST 120
  121 SAASSEKASS TLSSTAQPHR TSHSSSSFEL PVTAPSSSSL PSSTSLTFTS VNPS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [175-308]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QSWTSFNSEK SSALSSTIDF TSSEISGSTS PKSLESFDTT GTITSSYSPS PSSKNSNQTS  60
   61 LLSPLEPLSS SSGDLILSST IQATTNDQTS KTIPTLVDAT SSLPPTLRSS SMAPTSGSDS 120
  121 ISHNFTSPPS KTSG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [309-625]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NYDVLTSNSI DPSLFTTTSE YSSTQLSSLN RASKSETVNF TASIASTPFG TDSATSLIDP  60
   61 ISSVGSTASS FVGISTANFS TQGNSNYVPE STASGSSQYQ DWSSSSLPLS QTTWVVINTT 120
  121 NTQGSVTSTT SPAYVSTATK TVDGVITEYV TWCPLTQTKS QAIGVSSSIS SVPQASSFSG 180
  181 SSILSSNSST LAASNNVPES TASGSSQYQD WSSSSLPLSQ TTWVVINTTN TQGSVTSTTS 240
  241 PAYVSTATKT VDGVITEYVT WCPLTQTKSQ AIGISSSTIS ATQTSKPSSI LTLGISTLQL 300
  301 SDATFKGTET INTHLMT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [626-876]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 ESTSITEPTY FSGTSDSFYL CTSEVNLASS LSSYPNFSSS EGSTATITNS TVTFGSTSKY  60
   61 PSTSVSNPTE ASQHVSSSVN SLTDFTSNST ETIAVISNIH KTSSNKDYSL TTTQLKTSGM 120
  121 QTLVLSTVTT TVNGAATEYT TWCPASSIAY TTSISYKTLV LTTEVCSHSE CTPTVITSVT 180
  181 ATSSTIPLLS TSSSTVLSST VSEGAKNPAA SEVTINTQVS ATSEATSTST QVSATSATAT 240
  241 ASESSTTSQV S

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [877-1294]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TASETISTLG TQNFTTTGSL LFPALSTEMI NTTVVSRKTL IISTEVCSHS KCVPTVITEV  60
   61 VTSKGTPSNG HSSQTLQTEA VEVTLSSHQT VTMSTEVCSN SICTPTVITS VQMRSTPFPY 120
  121 LTSSTSSSSL ASTKKSSLEA SSEMSTFSVS TQSLPLAFTS SEKRSTTSVS QWSNTVLTNT 180
  181 IMSSSSNVIS TNEKPSSTTS PYNFSSGYSL PSSSTPSQYS LSTATTTING IKTVYTTWCP 240
  241 LAEKSTVAAS SQSSRSVDRF VSSSKPSSSL SQTSIQYTLS TATTTISGLK TVYTTWCPLT 300
  301 SKSTLGATTQ TSSTAKVRIT SASSATSTSI SLSTSTESES SSGYLSKGVC SGTECTQDVP 360
  361 TQSSSPASTL AYSPSVSTSS SSSFSTTTAS TLTSTHTSVP LLPSSSSISA SSPSSTSL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [1295-1609]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LSTSLPSPAF TSSTLPTATA VSSSTFIASS LPLSSKSSLS LSPVSSSILM SQFSSSSSSS  60
   61 SSLASLPSLS ISPTVDTVSV LQPTTSIATL TCTDSQCQQE VSTICNGSNC DDVTSTATTP 120
  121 PSTVTDTMTC TGSECQKTTS SSCDGYSCKV SETYKSSATI SACSGEGCQA SATSELNSQY 180
  181 VTMTSVITPS AITTTSVEVH STESTISITT VKPVTYTSSD TNGELITITS SSQTVIPSVT 240
  241 TIITRTKVAI TSAPKPTTTT YVEQRLSSSG IATSFVAAAS STWITTPIVS TYAGSASKFL 300
  301 CSKFFMIMVM VINFI

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle