YRC Public Data Repository - Protein Structure Prediction

Protein:	BUD31
Organism:	Saccharomyces cerevisiae
Length:	157 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BUD31.

Description	E-value	Query Range	Subject Range
BUD31_XENLA - Protein BUD31 homolog OS=Xenopus laevis GN=bud31 PE=2 SV=1	2.0E-62	[1..154]	[1..143]
gi\|229292493, gi... - gi\|229292493\|gb\|EEN63157.1\| hypothetical protein BRAFLDRAFT_113775 [Branchiostoma floridae], gi\|2194... BUD31_BRABE - Protein BUD31 homolog OS=Branchiostoma belcheri PE=2 SV=1	1.0E-61	[1..154]	[1..143]
gi\|3064070, gi\|1... - gi\|3064070\|gb\|AAC14190.1\| G10 protein homolog [Rattus norvegicus], gi\|16758328\|ref\|NP_446008.1\| BUD3...	4.0E-61	[1..154]	[1..143]
BD31A_ORYSJ - Protein BUD31 homolog 1 OS=Oryza sativa subsp. japonica GN=Os01g0857700 PE=2 SV=1 G10A_ORYSA, BD31... - (Q94DE2) Protein G10 homolog 1, Protein BUD31 homolog 1 (Protein G10 homolog 1) - Oryza sativa (Rice... gi\|218195697 - gi\|218195697\|gb\|EEC78124.1\| hypothetical protein OsI_17668 [Oryza sativa Indica Group]	3.0E-60	[1..157]	[1..145]
gi\|194204049, gi... - gi\|195566177\|ref\|XP_002106667.1\| GD15995 [Drosophila simulans], gi\|194204049\|gb\|EDX17625.1\| GD15995 ... gi\|220958146, gi... - gi\|220958146\|gb\|ACL91616.1\| l(1)10Bb-PA [synthetic construct], gi\|220949052\|gb\|ACL87069.1\| l(1)10Bb-... gi\|195350876, gi... - gi\|195350876\|ref\|XP_002041964.1\| GM11248 [Drosophila sechellia], gi\|194123769\|gb\|EDW45812.1\| GM11248... l(1)10Bb-PA - The gene lethal (1) 10Bb is referred to in FlyBase by the symbol Dmel\l(1)10Bb (CG1639, FBgn0001491)...	3.0E-60	[1..154]	[1..143]
gi\|151943877 - gi\|151943877\|gb\|EDN62177.1\| bud site selection protein [Saccharomyces cerevisiae YJM789] gi\|190406486 - gi\|190406486\|gb\|EDV09753.1\| bud site selection protein BUD31 [Saccharomyces cerevisiae RM11-1a] BUD31 - Component of the SF3b subcomplex of the U2 snRNP; diploid mutants display a random budding pattern i... BUD31_YEAST - Pre-mRNA-splicing factor BUD31 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=BUD31 PE=...	4.0E-60	[1..157]	[1..157]
gi\|15233517, gi\|... - pir\|\|T04942 G10 protein homolog F7J7.50 - Arabidopsis thaliana, gi\|7268908\|emb\|CAB79111.1\| G10-like...	2.0E-58	[1..157]	[1..145]
G10_ORYSA - (P35682) Protein G10 homolog gi\|303847 - gi\|303847\|dbj\|BAA02153.1\| maternal G10 like protein [Oryza sativa Japonica Group]	3.0E-56	[1..156]	[1..142]
CE00499 - G10 protein status:Confirmed UniProt:P34313 protein_id:CAA82338.1	7.0E-56	[6..154]	[8..146]

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Predicted Domain #1

Region A:
Residues: [1-157]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRIKTRRSK PAPDGFEKIK PTLTDFEIQL RDAQKDKSSK LAAKSNEQLW EIMQLHHQRS  60
   61 RYIYTLYYKR KAISKDLYDW LIKEKYADKL LIAKWRKTGY EKLCCLRCIQ KNETNNGSTC 120
  121 ICRVPRAQLE EEARKKGTQV SFHQCVHCGC RGCASTD

[Run NCBI BLAST on this sequence.]

Detection Method:	Pfam
Confidence:	128.920819
Match:	PF01125
Description:	G10 protein

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits