Protein: | VAC17 |
Organism: | Saccharomyces cerevisiae |
Length: | 423 amino acids |
Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for VAC17.
Description | E-value | Query Range |
Subject Range |
|
0.0 | [1..423] | [1..423] |
|
2.0E-97 | [229..423] | [1..195] |
|
0.01 | [8..97] | [294..371] |
Region A: Residues: [1-148] |
1 11 21 31 41 51 | | | | | | 1 MATQALEDIT ERLLIRSQEA ILQLDLWIQR QQRSSICQTT DQESLDKLSQ QYNQYMSQLN 60 61 SLYVRSESVR DKLSKEQQRR LITEDNEHQR IEDLVREFQD ITLRLNELAT VPNEAPNDSP 120 121 QSQSTRSSLG SFQPRPLKII ERQRLCMV |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
View | Download | 0.923 | 0.872 | vacuolar membrane | a.47.2 | t-snare proteins |
Region A: Residues: [149-206] |
1 11 21 31 41 51 | | | | | | 1 TPSKPPKKSV GFNPINEVDC PSKTNSLPCS PKKQPARNRT LRAAKSHDTG LNKSKKPS |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [207-423] |
1 11 21 31 41 51 | | | | | | 1 SSDTYESFFK NRQRLSLTFF DEMDDEDFDS DQDTIILPNI STPPHVGVTA KGAEFEPLRR 60 61 YNSHESILSN KPAPSKSLNL GSFSASFFRP SNPTFGTSIS NVQVNCHPTV AATMAPSRNG 120 121 PRISSSKALL SSFIARSDTH TVKENNTNLK HASFMDKFNS SLSTISESFQ SKRGRKNKGM 180 181 NEERISNHNV AQEQKNNMDI SVSIEELQDA LNTELLF |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.