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View Structure Prediction Details

Protein: MGR1
Organism: Saccharomyces cerevisiae
Length: 417 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for MGR1.

Description E-value Query
Range
Subject
Range
MGR1 - Subunit of the mitochondrial (mt) i-AAA protease supercomplex, which degrades misfolded mitochondria...
MGR1_YEAST - Mitochondrial inner membrane i-AAA protease supercomplex subunit MGR1 OS=Saccharomyces cerevisiae (s...
gi|207347391 - gi|207347391|gb|EDZ73581.1| YCL044Cp-like protein [Saccharomyces cerevisiae AWRI1631]
0.0 [1..417] [1..417]
gi|5650706 - gi|5650706|emb|CAB51613.1| hypothetical protein [Kluyveromyces lactis]
6.0E-62 [19..183] [8..161]

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Predicted Domain #1
Region A:
Residues: [1-215]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVFTPPSGN SNSTDHTHTQ DDHDKDDNDI KKFYIRPSLG LKLWGPLVPA PDNLPGLYTL  60
   61 ITIQSAVGFF ALWRLRRLYK LPPPRRIATG THSDLSFGEL PSEMIVNGKT KIKKDIADFP 120
  121 TLNRFSTTHG DIVLAPPPII PRQSRFVSVR KLLWGLFGSL LLSQSLLELT RLNFLKYDPW 180
  181 CDEMKSVRDK KFFNNIVKYY HEGIDPTKIK VKDAM

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [216-417]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NGTPLSTNIP EVKQSVALAR AQVEAQNPII KWFGPLEYKP MSFNEYLNRM EFHLDMFEFF  60
   61 QNKRNIRENS IELINSISHN PQSSSTGLEG LSESKKLHLQ NVEKRLHFLA SSGDSISAPV 120
  121 KKRSSTTLSR GVILPHDTKG PQDIDLDTIR SLYDPWMTLA LETSLSIKFI PTTMPSHTKT 180
  181 PTSTDQPLPG PTPKALTNEK TH

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle