| Protein: | ATG12 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 186 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATG12.
| Description | E-value | Query Range |
Subject Range |
|
|
200.0 | [0..55] | [186..54] |
|
|
200.0 | [0..67] | [186..21] |
|
|
196.0 | [0..67] | [186..20] |
|
|
192.0 | [0..71] | [186..24] |
|
|
190.0 | [0..56] | [186..10] |
|
|
188.0 | [0..55] | [186..7] |
|
|
169.0 | [0..67] | [186..22] |
|
Region A: Residues: [1-74] |
1 11 21 31 41 51
| | | | | |
1 MSRILESENE TESDESSIIS TNNGTAMERS RNNQELRSSP HTVQNRLELF SRRLSQLGLA 60
61 SDISVDQQVE DSSS
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.627 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.627 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.622 | d.52.9 | Description not found. |
| View | Download | 0.605 | d.52.8 | Description not found. |
| View | Download | 0.588 | d.52.9 | Description not found. |
| View | Download | 0.556 | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
| View | Download | 0.551 | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
| View | Download | 0.486 | d.253.1 | Description not found. |
| View | Download | 0.400 | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
| View | Download | 0.400 | d.80.1 | Tautomerase/MIF |
| View | Download | 0.397 | d.52.8 | Description not found. |
| View | Download | 0.393 | d.52.8 | Description not found. |
| View | Download | 0.385 | d.253.1 | Description not found. |
|
Region A: Residues: [75-186] |
1 11 21 31 41 51
| | | | | |
1 GTYEQEETIK TNAQTSKQKS HKDEKNIQKI QIKFQPIGSI GQLKPSVCKI SMSQSFAMVI 60
61 LFLKRRLKMD HVYCYINNSF APSPQQNIGE LWMQFKTNDE LIVSYCASVA FG
|
| Detection Method: | |
| Confidence: | 14.04 |
| Match: | |
| Description: | No description for 1kjtA was found. |
