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View Structure Prediction Details

Protein: AIM4
Organism: Saccharomyces cerevisiae
Length: 123 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AIM4.

Description E-value Query
Range
Subject
Range
gi|49644151, gi|... - gi|50310005|ref|XP_455016.1| unnamed protein product [Kluyveromyces lactis], gi|49644151|emb|CAH0010...
75.0 [0..69] [123..2]
AIM4_CANGA - Altered inheritance of mitochondria protein 4 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM ...
gi|49528889 - gi|49528889|emb|CAG62551.1| unnamed protein product [Candida glabrata]
73.0 [0..5] [123..10]

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Predicted Domain #1
Region A:
Residues: [1-123]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQKKDPSNN LTERRVSKVQ RPNKKKVRNQ VESLSRNLER NKEGQLLQTV SKGHLEADSG  60
   61 HSLGREKENG ELGIRSIFYD KDWNPRGTAP SHYRNIPYNP ATFKRRTEVQ ARLGNLENIK 120
  121 IPK

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle