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View Structure Prediction Details

Protein: RPS9B
Organism: Saccharomyces cerevisiae
Length: 195 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RPS9B.

Description E-value Query
Range
Subject
Range
gi|194196289, gi... - gi|195589072|ref|XP_002084280.1| GD12912 [Drosophila simulans], gi|194196289|gb|EDX09865.1| GD12912 ...
FBpp0309532, RpS... - The gene Ribosomal protein S9 is referred to in FlyBase by the symbol Dmel\RpS9 (CG3395, FBgn0010408...
gi|194118835, gi... - gi|195326350|ref|XP_002029892.1| GM24860 [Drosophila sechellia], gi|194118835|gb|EDW40878.1| GM24860...
gi|194179392, gi... - gi|195490797|ref|XP_002093291.1| RpS9 [Drosophila yakuba], gi|194179392|gb|EDW93003.1| RpS9 [Drosoph...
gi|194867971, gi... - gi|194867971|ref|XP_001972186.1| GG14025 [Drosophila erecta], gi|190653969|gb|EDV51212.1| GG14025 [D...
5.0E-68 [3..181] [5..183]
gi|149722554 - gi|149722554|ref|XP_001488074.1| PREDICTED: similar to ribosomal protein S9 [Equus caballus]
gi|167427248 - gi|167427248|gb|ABZ80228.1| ribosomal protein S9 (predicted) [Callithrix jacchus]
gi|53734323 - gb|AAH83997.1| Unknown (protein for MGC:98133) [Xenopus laevis]
gi|109126024 - gi|109126024|ref|XP_001082895.1| PREDICTED: similar to 40S ribosomal protein S9 [Macaca mulatta]
gi|114679016, gi... - gi|55649873|ref|XP_512888.1| PREDICTED: similar to ribosomal protein S9-like [Pan troglodytes], gi|1...
gi|217418300 - gi|217418300|gb|ACK44303.1| ribosomal protein S9 (predicted) [Oryctolagus cuniculus]
RS9_RAT - 40S ribosomal protein S9 OS=Rattus norvegicus GN=Rps9 PE=1 SV=4
gi|197215709 - gi|197215709|gb|ACH53097.1| ribosomal protein S9 (predicted) [Otolemur garnettii]
gi|229368769 - gi|229368769|gb|ACQ63049.1| ribosomal protein S9 (predicted) [Dasypus novemcinctus]
CCDS12884.1_1 - null
gi|190576593 - gi|190576593|gb|ACE79082.1| ribosomal protein S9 (predicted) [Sorex araneus]
RPS9 - ribosomal protein S9
tr|M3WJZ7|M3WJZ7... - Ribosomal protein S9 OS=Felis catus GN=RPS9 PE=3 SV=1
RS9_PAPAN - 40S ribosomal protein S9 OS=Papio anubis GN=RPS9 PE=3 SV=1
RS9_MOUSE - 40S ribosomal protein S9 OS=Mus musculus GN=Rps9 PE=1 SV=3
gi|184185529 - gi|184185529|gb|ACC68931.1| ribosomal protein S9 (predicted) [Rhinolophus ferrumequinum]
RS9_BOVIN - 40S ribosomal protein S9 OS=Bos taurus GN=RPS9 PE=2 SV=1
gi|73947567 - gi|73947567|ref|XP_533590.2| PREDICTED: similar to 40S ribosomal protein S9 [Canis familiaris]
gi|123995415, gi... - gi|60656367|gb|AAX32747.1| ribosomal protein S9 [synthetic construct], gi|208967336|dbj|BAG73682.1| ...
4.0E-67 [9..193] [10..194]
gi|57143, gi|135... - gi|57143|emb|CAA47013.1| ribosomal protein S9 [Rattus norvegicus], gi|13592067|ref|NP_112370.1| ribo...
9.0E-67 [9..193] [10..194]
gi|15294029 - gi|15294029|gb|AAK95191.1|AF402817_1 40S ribosomal protein S9 [Ictalurus punctatus]
3.0E-66 [9..179] [10..180]
gi|3098190 - gi|3098190|gb|AAC15543.1| small ribosomal protein 4 [Pohlia bolanderi]
5.0E-66 [19..194] [1..184]
gi|3098186 - gi|3098186|gb|AAC15541.1| small ribosomal protein 4 [Mnium hornum]
6.0E-66 [19..194] [1..184]
RS9A_YEAST - 40S ribosomal protein S9-A OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=RPS9A PE=1 SV...
RPS9A - Protein component of the small (40S) ribosomal subunit; nearly identical to Rps9Bp and has similarit...
gi|151942716 - gi|151942716|gb|EDN61062.1| ribosomal protein S9A [Saccharomyces cerevisiae YJM789]
6.0E-66 [1..185] [1..185]
gi|14276326 - gi|14276326|gb|AAK58201.1| small ribosomal protein 4 [Bartramia halleriana]
2.0E-65 [19..194] [1..184]

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Predicted Domain #1
Region A:
Residues: [1-65]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRAPRTYSK TYSTPKRPYE SSRLDAELKL AGEFGLKNKR EIYRISFQLS KIRRAARDLL  60
   61 TRDEK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 841.0103
Match: 1k5xD_
Description: No description for 1k5xD_ was found.

Predicted Domain #2
Region A:
Residues: [66-195]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DPKRLFEGNA LIRRLVRVGV LSEDKKKLDY VLALKVEDFL ERRLQTQVYK LGLAKSVHHA  60
   61 RVLITQRHIA VGKQIVNIPS FMVRLDSEKH IDFAPTSPFG GARPGRVARR NAARKAEASG 120
  121 EAAEEAEDEE 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 841.0103
Match: 1k5xD_
Description: No description for 1k5xD_ was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle