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View Structure Prediction Details

Protein: UBS1
Organism: Saccharomyces cerevisiae
Length: 277 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for UBS1.

Description E-value Query
Range
Subject
Range
gi|190408681 - gi|190408681|gb|EDV11946.1| ubiquitin-conjugating enzyme suppressor 1 [Saccharomyces cerevisiae RM11...
gi|207347613 - gi|207347613|gb|EDZ73727.1| YBR165Wp-like protein [Saccharomyces cerevisiae AWRI1631]
UBS1 - Ubiquitin-conjugating enzyme suppressor that functions as a general positive regulator of Cdc34p act...
UBS1_YEAST - Ubiquitin-conjugating enzyme suppressor 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) G...
0.0 [1..277] [1..277]

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Predicted Domain #1
Region A:
Residues: [1-277]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYSLTRKLL KDWKYFMRHP EKTQGLFHVR PHDSDLHLWH VVMYEPRTSL EVYLLLYIGG  60
   61 NDQDPYIIMK CLSPNCCFPI NRTVSMTHLN YLLLKDLGLQ DLLFHIWQPL FHIQATEDLQ 120
  121 YSPSTVKFNR AWNRIIYKDF KSYFPELIGT LQPGDYSIVK SYSKNHNISN SNGGSVNEFM 180
  181 SSYNAQSHTF HAQDNSKNPY TNSSIGKSSM LSTLNNNNVN KRTHDYNAID FMTKNLLACD 240
  241 DDSIHPVVSS KRSRTLACPD ETNDNRGSEH YTKRKKI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle