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View Structure Prediction Details

Protein: CCZ1
Organism: Saccharomyces cerevisiae
Length: 704 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CCZ1.

Description E-value Query
Range
Subject
Range
CCZ1_YEAST - Vacuolar fusion protein CCZ1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CCZ1 PE=1 S...
CCZ1 - Protein involved in vacuolar assembly, essential for autophagy and the cytoplasm-to-vacuole pathway
0.0 [1..704] [1..704]

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Predicted Domain #1
Region A:
Residues: [1-704]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLHYITVFD PSRSTNENDT FKQLLLFHYF GTTDSIPSLN EKLSIIGVIQ GIWSLTSSCV  60
   61 NKDGEDLEKI IELNNDIIFC IKVESRFFIS LAISNISDDQ SAIPLQYLSA YLWLSYRFFK 120
  121 LLNGSFSGFN KDFRKLTDLL NEFVIPFWND IYLNLETVTN RSFTVMWPGF YKRANFQHSS 180
  181 YNPGEKNNVE ESWDAIILQN ILLDKKSYLG LKDILVYHLP KRTKAANRES MGTKTYGLVR 240
  241 NFTSDLNTLP DISNWLYHLH CTYGEISSHI LTGNVHFKEE LQVEEEQERS RDTNGRDEEE 300
  301 SQEQQRREHQ ETTQNNTSEL SLSERVIHNV TLPISFAYDA IHEVSTTTGV SGSLSMIMDY 360
  361 VPKPHWPFIS SSNKSADKNN YSNSNDNANS NAPLMAQSEA VGGTIGNSRF GFLISPLNSD 420
  421 LLPSSYQALK LNLNFENSKD KEDFYNCLFW YFDDFLIVIV CDPDFNKICE RDYLKDLSFQ 480
  481 LCQSMECLNN EILNSQNCDN VESFAYVIRD NVTKEIDSSV PFGSPKFTSD ESISTLQLAI 540
  541 NGIDQFINDN SNSLSLANWN PITIMGGSNA ISKKNTTEGF GNGVNDKTQK FKRKYLNFLN 600
  601 LMSAEKLWDL QVDVLQFLTS LQNSKRDPDY FQEERLLKLN NGVLCYIKEN NSNLIIIIKN 660
  661 WFQNNGTSKA AKQRNRFSSD SSKGSSLFQS LGRDVTDWWE SREI

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle