YRC Public Data Repository - Protein Structure Prediction

Protein:	PHO88
Organism:	Saccharomyces cerevisiae
Length:	188 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PHO88.

Description	E-value	Query Range	Subject Range
gi\|151946498 - gi\|151946498\|gb\|EDN64720.1\| phosphate metabolism-related protein [Saccharomyces cerevisiae YJM789] gi\|207347680 - gi\|207347680\|gb\|EDZ73773.1\| YBR106Wp-like protein [Saccharomyces cerevisiae AWRI1631] PHO88_YEAST - Inorganic phosphate transport protein PHO88 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)... PHO88 - Probable membrane protein, involved in phosphate transport; pho88 pho86 double null mutant exhibits ... gi\|190408735 - gi\|190408735\|gb\|EDV12000.1\| inorganic phosphate transporter PHO88 [Saccharomyces cerevisiae RM11-1a]	1.0E-78	[1..188]	[1..188]
SPAC589.06c - pho88 family protein YKP6_SCHPO - Uncharacterized protein C589.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC589.0...	2.0E-68	[1..188]	[1..186]
gi\|19074964, gi\|... - gi\|19074964\|ref\|NP_586470.1\| INORGANIC PHOSPHATE TRANSPORTER [Encephalitozoon cuniculi GB-M1], gi\|19... gi\|19074964 - gi\|19074964\|ref\|NP_586470.1\| INORGANIC PHOSPHATE TRANSPORTER [Encephalitozoon cuniculi GB-M1]	1.0E-56	[4..176]	[10..176]

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Predicted Domain #1

Region A:
Residues: [1-188]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNPQVSNIII MLVMMQLSRR IDMEDPTIIM YIRILYCSSI GISWIIYQMA RKRIVAKNDM  60
   61 TTMKYVEPGN AMSGEGEKLQ VTTVRDYDLK EIDSAIKSIY TGMAMMGFMH LYLKYTNPLF 120
  121 MQSISPVKSA LEHNEVKIHL FGKPATGDLK RPFKAPSLFG GMGQTGPKTD KKSIEEAERA 180
  181 GNAGVKAE

[Run NCBI BLAST on this sequence.]

Detection Method:

deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits