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View Structure Prediction Details

Protein: YMC2
Organism: Saccharomyces cerevisiae
Length: 329 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YMC2.

Description E-value Query
Range		 Subject
Range
gi|7507776 - gi|7507776|pir||T16867 probable cytochrome P450 T13C5.1 [similarity] - Caenorhabditis elegans
 2.0E-81 [5..327] [165..471]
ADT3_BOVIN - ADP/ATP translocase 3 OS=Bos taurus GN=SLC25A6 PE=1 SV=3
 2.0E-81 [30..324] [4..296]
SLC25A31 - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31
gi|117645348 - gi|117645348|emb|CAL38140.1| hypothetical protein [synthetic construct]
HGNC:25319|MIM:6... - carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 31
 7.0E-81 [18..326] [4..308]
ADT1_MOUSE - ADP/ATP translocase 1 OS=Mus musculus GN=Slc25a4 PE=1 SV=4
 1.0E-79 [29..325] [3..297]
ADT1_RAT - ADP/ATP translocase 1 OS=Rattus norvegicus GN=Slc25a4 PE=1 SV=3
 2.0E-79 [29..325] [3..297]

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Predicted Domain #1
Region A:
Residues: [1-129] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEEFPTPQL LDELEDQQKV TTPNEKRELS SNRVLKDIFA GTIGGIAQVL VGQPFDTTKV  60
   61 RLQTATTRTT TLEVLRNLVK NEGVFAFYKG ALTPLLGVGI CVSVQFGVNE AMKRFFQNYN 120
  121 ASKNPNMSS

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 26.769551
Match: PF00153
Description: Mitochondrial carrier protein

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [130-236] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QDVDLSRSNT LPLSQYYVCG LTGGVVNSFL ASPIEQIRIR LQTQTSNGGD REFKGPWDCI  60
   61 KKLKAQGGLM RGLFPTMIRA GHGLGTYFLV YEALVAREIG TGLTRNE

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 19.387216
Match: PF00153
Description: Mitochondrial carrier protein

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [237-329] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IPPWKLCLFG AFSGTMLWLT VYPLDVVKSI IQNDDLRKPK YKNSISYVAK TIYAKEGIRA  60
   61 FFKGFGPTMV RSAPVNGATF LTFELVMRFL GEE

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 23.275724
Match: PF00153
Description: Mitochondrial carrier protein

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle