| Protein: | SIF2 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 535 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SIF2.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [15..535] | [914..1458] |
|
|
0.0 | [35..535] | [818..1299] |
|
Region A: Residues: [1-187] |
1 11 21 31 41 51
| | | | | |
1 MSITSEELNY LIWRYCQEMG HEVSALALQD ETRVLEFDEK YKEHIPLGTL VNLVQRGILY 60
61 TESELMVDSK GDISALNEHH LSEDFNLVQA LQIDKEKFPE ISSEGRFTLE TNSESNKAGE 120
121 DGASTVERET QEDDTNSIDS SDDLDGFVKI LKEIVKLDNI VSSTWNPLDE SILAYGEKNS 180
181 VARLARI
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [188-535] |
1 11 21 31 41 51
| | | | | |
1 VETDQEGKKY WKLTIIAELR HPFALSASSG KTTNQVTCLA WSHDGNSIVT GVENGELRLW 60
61 NKTGALLNVL NFHRAPIVSV KWNKDGTHII SMDVENVTIL WNVISGTVMQ HFELKETGGS 120
121 SINAENHSGD GSLGVDVEWV DDDKFVIPGP KGAIFVYQIT EKTPTGKLIG HHGPISVLEF 180
181 NDTNKLLLSA SDDGTLRIWH GGNGNSQNCF YGHSQSIVSA SWVGDDKVIS CSMDGSVRLW 240
241 SLKQNTLLAL SIVDGVPIFA GRISQDGQKY AVAFMDGQVN VYDLKKLNSK SRSLYGNRDG 300
301 ILNPLPIPLY ASYQSSQDND YIFDLSWNCA GNKISVAYSL QEGSVVAI
|
| Detection Method: | |
| Confidence: | 130.29073 |
| Match: | 1gg2B_ |
| Description: | beta1-subunit of the signal-transducing G protein heterotrimer |
Matching Structure (courtesy of the PDB): |
|
