YRC Public Data Repository - Protein Structure Prediction

Protein:	RPL32
Organism:	Saccharomyces cerevisiae
Length:	130 amino acids
Reference:	Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RPL32.

Description	E-value	Query Range	Subject Range
RL32_RAT - 60S ribosomal protein L32 OS=Rattus norvegicus GN=Rpl32 PE=1 SV=2 gi\|109034297, gi... - gi\|109034297\|ref\|XP_001084402.1\| PREDICTED: similar to 60S ribosomal protein L32 isoform 2 [Macaca m... RL32_MOUSE - 60S ribosomal protein L32 OS=Mus musculus GN=Rpl32 PE=1 SV=2 RL32_CANLF - 60S ribosomal protein L32 OS=Canis lupus familiaris GN=RPL32 PE=1 SV=1 gi\|123996183, gi... - gi\|61364732\|gb\|AAX42594.1\| ribosomal protein L32 [synthetic construct], gi\|123996183\|gb\|ABM85693.1\| ... tr\|M3WW95\|M3WW95... - Ribosomal protein L32 OS=Felis catus GN=RPL32 PE=4 SV=1 ENSOCUP000000241... - pep:novel chromosome:oryCun2:20:18517540:18517947:1 gene:ENSOCUG00000026727 transcript:ENSOCUT000000... RL32_MACFA - 60S ribosomal protein L32 OS=Macaca fascicularis GN=RPL32 PE=2 SV=3 RL32_PIG - 60S ribosomal protein L32 OS=Sus scrofa GN=RPL32 PE=1 SV=3 gi\|51980358 - gb\|AAH82173.1\| Unknown (protein for MGC:98578) [Xenopus laevis] gi\|114585502, gi... - gi\|55634511\|ref\|XP_508028.1\| PREDICTED: hypothetical protein isoform 3 [Pan troglodytes], gi\|1146327... gi\|55743130, gi\|... - ref\|NP_001007075.1\| ribosomal protein L32 [Homo sapiens], ref\|NP_001007074.1\| ribosomal protein L32... RPL32 - ribosomal protein L32 ENSCJAT000000326... - null, null, null	9.0E-53	[4..129]	[7..132]
RL32_ICTPU - 60S ribosomal protein L32 OS=Ictalurus punctatus GN=rpl32 PE=2 SV=1	5.0E-51	[4..129]	[7..132]
gi\|17933355 - gi\|17933355\|gb\|AAL48255.1\|AF450502_1 ribosomal protein L32 [Epinephelus coioides]	2.0E-50	[4..129]	[7..132]
RL32P_MOUSE - Putative 60S ribosomal protein L32' OS=Mus musculus GN=Rpl32-ps PE=5 SV=2	1.0E-48	[4..129]	[7..132]
RL32_DROAC - 60S ribosomal protein L32 OS=Drosophila acanthoptera GN=RpL32 PE=2 SV=1	1.0E-47	[6..129]	[8..131]
gi\|194905756, gi... - gi\|194905756\|ref\|XP_001981251.1\| GG11969 [Drosophila erecta], gi\|190655889\|gb\|EDV53121.1\| GG11969 [D... gi\|193915469, gi... - gi\|195108589\|ref\|XP_001998875.1\| GI23390 [Drosophila mojavensis], gi\|193915469\|gb\|EDW14336.1\| GI2339... gi\|195341423, gi... - gi\|195341423\|ref\|XP_002037309.1\| GM12186 [Drosophila sechellia], gi\|194131425\|gb\|EDW53468.1\| GM12186... RpL32-PA, RpL32-... - The gene Ribosomal protein L32 is referred to in FlyBase by the symbol Dmel\RpL32 (CG7939, FBgn00026... gi\|194142853, gi... - gi\|195395040\|ref\|XP_002056144.1\| ribosomal protein L32 [Drosophila virilis], gi\|194142853\|gb\|EDW5925... RL32_DROSI - 60S ribosomal protein L32 OS=Drosophila simulans GN=RpL32 PE=3 SV=1 RL32_DROYA - 60S ribosomal protein L32 OS=Drosophila yakuba GN=RpL32 PE=2 SV=1	3.0E-47	[6..129]	[8..131]
RL32_SPOFR - 60S ribosomal protein L32 OS=Spodoptera frugiperda GN=RpL32 PE=2 SV=1	2.0E-46	[6..129]	[8..131]
gi\|6118520 - gi\|6118520\|gb\|AAF04131.1\|AF190579_1 ribosomal protein L32 [Ovis aries]	1.0E-45	[4..119]	[3..118]
RL32_APIME - 60S ribosomal protein L32 OS=Apis mellifera GN=RpL32 PE=2 SV=1	2.0E-45	[6..129]	[8..131]
RL321_ARATH - 60S ribosomal protein L32-1 OS=Arabidopsis thaliana GN=RPL32A PE=2 SV=2	7.0E-42	[1..129]	[3..130]

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Predicted Domain #1

Region A:
Residues: [1-58]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASLPHPKIV KKHTKKFKRH HSDRYHRVAE NWRKQKGIDS VVRRRFRGNI SQPKIGYG

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	515.0
Match:	1k5yX_
Description:	No description for 1k5yX_ was found.

Predicted Domain #2

Region A:
Residues: [59-130]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SNKKTKFLSP SGHKTFLVAN VKDLETLTMH TKTYAAEIAH NISAKNRVVI LARAKALGIK  60
   61 VTNPKGRLAL EA

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	515.0
Match:	1k5yX_
Description:	No description for 1k5yX_ was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits