Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RPS8B, RPS8A.
| Description | E-value | Query Range |
Subject Range |
|
|
2.0E-89 | [1..200] | [1..206] |
|
|
8.0E-89 | [1..200] | [1..206] |
|
|
5.0E-85 | [1..200] | [1..206] |
|
|
7.0E-82 | [1..200] | [1..214] |
|
|
1.0E-81 | [1..200] | [1..200] |
|
|
3.0E-81 | [1..200] | [1..206] |
|
|
7.0E-81 | [1..200] | [1..200] |
|
|
1.0E-80 | [1..193] | [1..196] |
|
|
6.0E-80 | [1..200] | [1..215] |
|
Region A: Residues: [1-128] |
1 11 21 31 41 51
| | | | | |
1 MGISRDSRHK RSATGAKRAQ FRKKRKFELG RQPANTKIGA KRIHSVRTRG GNKKYRALRI 60
61 ETGNFSWASE GISKKTRIAG VVYHPSNNEL VRTNTLTKAA IVQIDATPFR QWFEAHYGQT 120
121 LGKKKNVK
|
| Detection Method: |  |
| Confidence: | 83.60206 |
| Match: | PF01201 |
| Description: | Ribosomal protein S8e |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [129-200] |
1 11 21 31 41 51
| | | | | |
1 EEETVAKSKN AERKWAARAA SAKIESSVES QFSAGRLYAC ISSRPGQSGR CDGYILEGEE 60
61 LAFYLRRLTA KK
|
| Detection Method: | |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.372 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.384 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.383 | N/A | N/A | a.60.2 | RuvA domain 2-like |
| View | Download | 0.310 | N/A | N/A | a.36.1 | Signal peptide-binding domain |
| View | Download | 0.303 | N/A | N/A | a.4.6 | C-terminal effector domain of the bipartite response regulators |
| View | Download | 0.279 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.311 | N/A | N/A | a.48.3 | Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 |
| View | Download | 0.400 | N/A | N/A | a.159.1 | Protein serine/threonine phosphatase 2C, C-terminal domain |
| View | Download | 0.251 | N/A | N/A | a.5.6 | Hypothetical protein MTH1615 |
| View | Download | 0.271 | N/A | N/A | a.3.1 | Cytochrome c |
| View | Download | 0.262 | N/A | N/A | a.60.5 | Barrier-to-autointegration factor, BAF |
| View | Download | 0.262 | N/A | N/A | f.14.1 | Voltage-gated potassium channels |
| View | Download | 0.260 | N/A | N/A | a.159.1 | Protein serine/threonine phosphatase 2C, C-terminal domain |
| View | Download | 0.256 | N/A | N/A | d.120.1 | Cytochrome b5 |
| View | Download | 0.253 | N/A | N/A | a.159.1 | Protein serine/threonine phosphatase 2C, C-terminal domain |
| View | Download | 0.248 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.246 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.244 | N/A | N/A | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.240 | N/A | N/A | a.50.1 | Anaphylotoxins (complement system) |
| View | Download | 0.231 | N/A | N/A | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.226 | N/A | N/A | a.61.1 | Retroviral matrix proteins |
| View | Download | 0.225 | N/A | N/A | a.3.1 | Cytochrome c |
| View | Download | 0.224 | N/A | N/A | a.4.1 | Homeodomain-like |
| View | Download | 0.223 | N/A | N/A | a.24.13 | Domain of the SRP/SRP receptor G-proteins |
| View | Download | 0.221 | N/A | N/A | a.39.1 | EF-hand |
| View | Download | 0.216 | N/A | N/A | a.60.2 | RuvA domain 2-like |
| View | Download | 0.214 | N/A | N/A | a.60.2 | RuvA domain 2-like |
| View | Download | 0.208 | N/A | N/A | a.56.1 | CO dehydrogenase ISP C-domain like |
| View | Download | 0.207 | N/A | N/A | a.60.2 | RuvA domain 2-like |
| View | Download | 0.204 | N/A | N/A | a.35.1 | lambda repressor-like DNA-binding domains |
