| Protein: | POP8 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 133 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for POP8.
| Description | E-value | Query Range |
Subject Range |
|
|
4.0E-67 | [1..133] | [1..133] |
|
Region A: Residues: [1-133] |
1 11 21 31 41 51
| | | | | |
1 MGKKTFREWQ YFKLSITSFD QDVDDAHAID QMTWRQWLNN ALKRSYGIFG EGVEYSFLHV 60
61 DDKLAYIRVN HADKDTFSSS ISTYISTDEL VGSPLTVSIL QESSSLRLLE VTDDDRLWLK 120
121 KVMEEEEQDC KCI
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.560 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.587 | d.58.18 | Regulatory domain in the aminoacid metabolism |
| View | Download | 0.546 | d.58.12 | eEF-1beta-like |
| View | Download | 0.695 | d.58.20 | NAD-binding domain of HMG-CoA reductase |
| View | Download | 0.670 | d.58.22 | TRADD, N-terminal domain |
| View | Download | 0.545 | a.74.1 | Cyclin-like |
| View | Download | 0.527 | d.130.1 | S-adenosylmethionine synthetase |
| View | Download | 0.520 | d.65.1 | Hedgehog/DD-pepidase |
| View | Download | 0.512 | d.185.1 | LuxS/MPP-like metallohydrolase |
| View | Download | 0.511 | a.60.9 | lambda integrase-like, N-terminal domain |
| View | Download | 0.485 | c.48.1 | TK C-terminal domain-like |
| View | Download | 0.479 | d.87.1 | FAD/NAD-linked reductases, dimerisation (C-terminal) domain |
| View | Download | 0.446 | c.48.1 | TK C-terminal domain-like |
| View | Download | 0.431 | b.40.1 | Staphylococcal nuclease |
| View | Download | 0.424 | d.122.1 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |
| View | Download | 0.412 | c.23.1 | CheY-like |
| View | Download | 0.389 | c.2.1 | NAD(P)-binding Rossmann-fold domains |
| View | Download | 0.388 | d.81.1 | Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain |
| View | Download | 0.382 | b.6.1 | Cupredoxins |
| View | Download | 0.373 | a.118.1 | ARM repeat |
| View | Download | 0.371 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.369 | d.24.1 | Pili subunits |
| View | Download | 0.364 | c.47.1 | Thioredoxin-like |
| View | Download | 0.358 | d.58.4 | Dimeric alpha+beta barrel |
| View | Download | 0.350 | f.36.1 | Neurotransmitter-gated ion-channel pransmembrane pore |
| View | Download | 0.344 | d.87.2 | CO dehydrogenase flavoprotein C-terminal domain-like |
| View | Download | 0.343 | d.88.1 | SRF-like |
| View | Download | 0.322 | d.52.3 | Prokaryotic type KH domain (KH-domain type II) |
| View | Download | 0.321 | d.122.1 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase |
| View | Download | 0.310 | d.110.4 | SNARE-like |
| View | Download | 0.309 | a.60.10 | Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain |
| View | Download | 0.302 | d.134.1 | Sulfite reductase hemoprotein (SiRHP), domains 2 and 4 |
| View | Download | 0.302 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.301 | d.15.6 | Superantigen toxins, C-terminal domain |
| View | Download | 0.300 | d.58.39 | Glutamyl tRNA-reductase catalytic, N-terminal domain |
| View | Download | 0.299 | d.80.1 | Tautomerase/MIF |
| View | Download | 0.295 | d.129.1 | TATA-box binding protein-like |
| View | Download | 0.294 | c.23.6 | Cobalamin (vitamin B12)-binding domain |
| View | Download | 0.288 | f.1.4 | Bcl-2 inhibitors of programmed cell death |
| View | Download | 0.288 | c.95.1 | Thiolase-like |
| View | Download | 0.274 | d.58.7 | RNA-binding domain, RBD |
| View | Download | 0.267 | a.25.1 | Ferritin-like |
| View | Download | 0.266 | c.52.1 | Restriction endonuclease-like |
| View | Download | 0.264 | d.185.1 | LuxS/MPP-like metallohydrolase |
| View | Download | 0.262 | c.37.1 | P-loop containing nucleoside triphosphate hydrolases |
| View | Download | 0.253 | d.110.2 | GAF domain-like |
| View | Download | 0.251 | c.10.1 | RNI-like |
| View | Download | 0.247 | d.153.1 | N-terminal nucleophile aminohydrolases (Ntn hydrolases) |
| View | Download | 0.244 | b.55.1 | PH domain-like |
| View | Download | 0.241 | c.55.2 | Creatinase/prolidase N-terminal domain |
| View | Download | 0.241 | a.118.9 | ENTH/VHS domain |
| View | Download | 0.241 | a.63.1 | Apolipophorin-III |
| View | Download | 0.225 | b.123.1 | Hypothetical protein TM1070 |
| View | Download | 0.224 | d.58.44 | Multidrug efflux transporter AcrB pore domain; PN1, PN2, PC1 and PC2 subdomains |
| View | Download | 0.222 | a.27.1 | Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases |
| View | Download | 0.217 | d.52.7 | Ribosome-binding factor A, RbfA |
| View | Download | 0.216 | d.15.6 | Superantigen toxins, C-terminal domain |
| View | Download | 0.215 | a.118.12 | Ran-GTPase activating protein 1 (RanGAP1), C-terminal domain |
| View | Download | 0.214 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.211 | a.63.1 | Apolipophorin-III |
| View | Download | 0.207 | b.84.2 | Rudiment single hybrid motif |
| View | Download | 0.202 | a.29.2 | Bromodomain |
| View | Download | 0.201 | d.58.35 | Pseudouridine synthase |
