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View Structure Prediction Details

Protein: YHR213W, YAR062W
Organism: Saccharomyces cerevisiae
Length: 198 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YHR213W, YAR062W.

Description E-value Query
Range
Subject
Range
gi|66866444 - gi|66866444|gb|AAY57869.1| FLO1/YAR062W fusion protein [Saccharomyces cerevisiae]
276.0 [0..1] [198..140]
gi|49525285 - gi|49525285|emb|CAG58898.1| unnamed protein product [Candida glabrata]
gi|49525285, gi|... - gi|50287099|ref|XP_445979.1| EPA1_CANGA [Candida glabrata], gi|49525285|emb|CAG58898.1| unnamed prot...
227.0 [0..1] [189..145]
gi|34809538 - gi|34809538|gb|AAQ82691.1| Epa1p [Candida glabrata]
227.0 [0..1] [189..145]
gi|19072710 - gi|19072710|gb|AAL84600.1|AF474332_1 HA-tagged epithelial adhesion 1 [Cloning vector pBC214]
226.0 [0..1] [189..182]

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Predicted Domain #1
Region A:
Residues: [1-115]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGYFLPPQT SSYTFRFAKV DDSAILSVGG NVAFECCAQE QPPITSTDFT INGIKPWQGS  60
   61 LPDNIGGTVY MYAGYYYPLK VVYSNAVSWG TLPISVELPD GTTVSDDFEG YVYSF

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 11.275724
Match: PF07691.3
Description: No description for PF07691.3 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

    MCM
Score
GO
Score
GO
Term
SCOP
Match
SCOP Description
View Download 0.418 N/A N/A b.61.3 D-aminopeptidase, middle and C-terminal domains
View Download 0.412 N/A N/A d.105.1 Clathrin adaptor appendage, alpha and beta chain-specific domain
View Download 0.409 N/A N/A b.1.1 Immunoglobulin
View Download 0.398 N/A N/A d.105.1 Clathrin adaptor appendage, alpha and beta chain-specific domain
View Download 0.297 N/A N/A d.105.1 Clathrin adaptor appendage, alpha and beta chain-specific domain

Predicted Domain #2
Region A:
Residues: [116-198]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DDDLSQSNCT IPDPSKHTTS IVTTTTELWT GTFTSTSTEM TTVTGTNGQP TDETVIVAKA  60
   61 PTTATSSSLS SSSSEQITSS ITS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle