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View Structure Prediction Details

Protein: YHR212W-A, YAR061W
Organism: Saccharomyces cerevisiae
Length: 67 amino acids
Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YHR212W-A, YAR061W.

Description E-value Query
Range
Subject
Range
gi|61612142 - gi|61612142|gb|AAX47297.1| flocculin [Saccharomyces cerevisiae]
119.0 [0..1] [64..3]
gi|8574441, gi|8... - gi|8574443|dbj|BAA96796.1| flocculin [Saccharomyces pastorianus], gi|8574441|dbj|BAA96795.1| floccul...
108.0 [0..1] [63..3]

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Predicted Domain #1
Region A:
Residues: [1-67]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPYHYLFLAL FTYLATSNVV SGSTQACLPV GPRKNGMNVN FYKYSLLDST TYSYPQYMTS  60
   61 GYASNWN

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Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

    MCM
Score
SCOP
Match
SCOP Description
View Download 0.523 a.4.5 "Winged helix" DNA-binding domain
View Download 0.523 a.4.5 "Winged helix" DNA-binding domain
View Download 0.423 f.17.5 Description not found.
View Download 0.394 a.24.9 alpha-catenin/vinculin
View Download 0.390 a.35.1 lambda repressor-like DNA-binding domains
View Download 0.369 a.2.18 Description not found.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle