| Protein: | TPD3 |
| Organism: | Saccharomyces cerevisiae |
| Length: | 635 amino acids |
| Reference: | Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TPD3.
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [30..633] | [2..584] |
|
|
0.0 | [30..633] | [2..584] |
|
|
1.0E-98 | [33..633] | [3..582] |
|
|
2.0E-97 | [30..633] | [2..584] |
|
Region A: Residues: [1-224] |
1 11 21 31 41 51
| | | | | |
1 MSGARSTTAG AVPSAATTST TSTTSNSKDS DSNESLYPLA LLMDELKHDD IANRVEAMKK 60
61 LDTIALALGP ERTRNELIPF LTEVAQDDED EVFAVLAEQL GKFVPYIGGP QYATILLPVL 120
121 EILASAEETL VREKAVDSLN NVAQELSQEQ LFSDFVPLIE HLATADWFSS KVSACGLFKS 180
181 VIVRIKDDSL RKNILALYLQ LAQDDTPMVK RAVGKNLPIL IDLL
|
| Detection Method: |  |
| Confidence: | 1384.39794 |
| Match: | 1b3uA_ |
| Description: | Constant regulatory domain of protein phosphatase 2a, pr65alpha |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [225-296] |
1 11 21 31 41 51
| | | | | |
1 TQNLGLSTDE DWDYISNIFQ KIINDNQDSV KFLAVDCLIS ILKFFNAKGD ESHTQDLLNS 60
61 AVKLIGDEAW RV
|
| Detection Method: | |
| Confidence: | 1384.39794 |
| Match: | 1b3uA_ |
| Description: | Constant regulatory domain of protein phosphatase 2a, pr65alpha |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [297-441] |
1 11 21 31 41 51
| | | | | |
1 RYMAADRFSD LASQFSSNQA YIDELVQPFL NLCEDNEGDV REAVAKQVSG FAKFLNDPSI 60
61 ILNKILPAVQ NLSMDESETV RSALASKITN IVLLLNKDQV INNFLPILLN MLRDEFPDVR 120
121 LNIIASLKVV NDVIGIELLS DSLLP
|
| Detection Method: | |
| Confidence: | 1384.39794 |
| Match: | 1b3uA_ |
| Description: | Constant regulatory domain of protein phosphatase 2a, pr65alpha |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [442-635] |
1 11 21 31 41 51
| | | | | |
1 AITELAKDVN WRVRMAIIEY IPILAEQLGM QFFDQQLSDL CLSWLWDTVY SIREAAVNNL 60
61 KRLTEIFGSD WCRDEIISRL LKFDLQLLEN FVSRFTILSA LTTLVPVVSL DVVTEQLLPF 120
121 ISHLADDGVP NIRFNVAKSY AVIVKVLIKD EAKYDALIKN TILPSLQTLC QDEDVDVKYF 180
181 AKKSLAECQE LLKN
|
| Detection Method: | |
| Confidence: | 1384.39794 |
| Match: | 1b3uA_ |
| Description: | Constant regulatory domain of protein phosphatase 2a, pr65alpha |
| Matching Structure (courtesy of the PDB): |
|
