YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: FBpp0306402
Organism: Drosophila melanogaster
Length: 1517 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FBpp0306402.

Description E-value Query
Range
Subject
Range
gi|37910109 - gi|37910109|gb|AAP04482.1| bitesize isoform 3 [Drosophila melanogaster]
1352.0 [0..1] [1517..1]

Back

Predicted Domain #1
Region A:
Residues: [1-105]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MINKDNESAA GDYEMANSSS NFSNIRHKDP TSSNNSHTVG QNFASDSFRA MEPTELVSSD  60
   61 REAYSVDSLN EPPAVPELSV EDGLADDDSW VEELSQRGED EDEDL

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [106-276]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SNATTTPTAT DSEDAEGEGE GARRHGYMDR EEDLRGYNRS AIDFTLHTIV EESCEESEVA  60
   61 SMRADNEDVE LEDEDLSERR RQRTLQHHHR LSASELEKYF FFGLGDGRVM SSIDTRGDDT 120
  121 ASEVSSECSE SLDSLPHEDQ LLDTSGASDL ASSRLEKYFL SGFMGFSGAE K

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [277-402]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QAESDESGGS VGSDSEGQPS PSQRRKRLVR ARGTPRSHNS SLDNLLLPES DTLDATVTSA  60
   61 GGAAAATVED TSESEAGCDD TVIHLANAGA SDGSSSDTIK RKKQLRKRHD SLDEKKLHDL 120
  121 EPSECR

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [403-667]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TPTPGSSGQV QMQSQAKKQQ QQHHHSRDSG FVGSNDDLLK AAPDCEPPKS PTPALEQISE  60
   61 DREPVHSQIS LARMDQPSTS AAAAVASTLS SQLKNLALPN LVRKDSFNNW SSDEETNLMM 120
  121 SKMRQFFKNL IVATANAQQS KPSTPNQGPS TTNVNTTPSS QRRLAKSRPA QLAYFENELT 180
  181 RLMKTVPGIN DEQVREIVEY LSSEDTWSDS YDSSDYTSSD LEGGERKGQL KAQISASCQQ 240
  241 IINKFEIDEE GDRGDGGLLD ESQSV

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [668-854]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PMEALVYQKL VASFSKVAAG GEPETEATKA VEEAEPSTER SPQLFAKVMQ HIGTRLVALM  60
   61 HEVSSGNETP TPSPQGQRHH RRLQAKISAT TTEDEEDEVA EQLKAMPIKQ LKLRSKSHDL 120
  121 LLDGTTPHSH HLHHHATVHY PAGGVGSGAG GSGGPGHSDN AGEECGVTSD YERFSWRGSF 180
  181 ESALLAN

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #6
Region A:
Residues: [855-1059]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GDSRTRLSQL SQLDRDNSSS ASALAVAKRR SAGDLLFSQH QQSLSREQLD RVRSCGSIGG  60
   61 GDAHHHQLES SPAKPWLSSA GSSIGGDSTK DVRRSSVPDA IYETDSSDEA ASHQFGGARS 120
  121 TLPRSLNPNQ VVASTNSLPR LPTTGVGAPI TSTPKTKSQS ALNHTPSNLS TVSATGSAKS 180
  181 ARYRSPGLAA RAAAVSGAGG GSSGG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #7
Region A:
Residues: [1060-1175]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VGVGASSGST GKKLGAGFQF LYSKRDARKR LNMSAEEAKV AAEELSRSPV IGQRQADGSG  60
   61 SPIQSRASSE TWPTQSDEDI DRLVAMHQNR SSLSSLGVRS ESMASVYSGA GEGRYG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #8
Region A:
Residues: [1176-1517]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TVVVKGQVEF AMQYNYKLSA LEVHVVRCKD LAAVDAKRNR SDPYVKVYLL PDKSKAGKRK  60
   61 TKVKKHTLNP IFDETMRFHT PISSLESRTL WLTVWHSDMF GRNDFLGEVS VNLQGRLFDN 120
  121 PQSQWYLLQE RSEPFDEVAT YRGDIVVGLK YIPPENIKSS FFSRGSSITG SSSNLRKFGG 180
  181 SIKSVASKSE RTSKGGQLHV LVKEAKHLSP IKANGTCDAF CKSYLLPDRT RSSKQKTPVV 240
  241 KRTLHPSWNY TFVYEDVSLE ELSERALELT VWDHDRLASN EFVGGIRFSL GTGRSYGRQV 300
  301 EWMDATGKEL SLWQNMLDRP NFWVEGSLVL RSSLDGIRAN LP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 70.0
Match: 1dqvA
Description: Synaptogamin I
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle