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View Structure Prediction Details

Protein: ppk20-PA
Organism: Drosophila melanogaster
Length: 587 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ppk20-PA.

Description E-value Query
Range
Subject
Range
gi|38197485 - gi|38197485|gb|AAH06526.2| SCNN1A protein [Homo sapiens]
397.0 [0..4] [562..74]

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Predicted Domain #1
Region A:
Residues: [1-587]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKGDNSVKP TEAAGFGDNE RCLADLLKVH FRSYCEKSTI HCVRYLYDSH LHNLERFVVY  60
   61 PLFISTFNFK LYIIIVFRII WSMLLIISIG LSFFFYLLLS ERFVSQKLQT VVHDPQFPVF 120
  121 LVPFPAVGIC TDNRINWNKL EAAKEQFLPT NASVELVESF TVLVSRMETL RFGSYLSSLA 180
  181 ELEDDNLEAV GFVNLTELAI FMTLQCSDIM VPKSCLWRSS SFNCCEYFVL EKTEFGFCLV 240
  241 FNSEVSPRSK AIKQKEGNNF YPRHNAKAGQ STGLNFDLIL NESFRRPDSQ ANNNVYVSIC 300
  301 QAPDQLNNVV YSITQNTETY VTVRPGLTWT DNTTRSIPPE RRNCLFADEQ GELDANDSAK 360
  361 NFGKPFQLSN CLNRCHESYL IQLCNCSLPI FFLYNHRVPD CNAVSLRCLA RHNDIFSYDK 420
  421 RRDEDALFSA TKLGMTCSCL VDCYLLDYYT STTTLPLSAH KLPKDPHQKL FRVDVHYQVE 480
  481 TTPLYRTSLE FTIIDLIANL GGIFGLCLGA SMVSAFELIY YLTVGLAMHL YDHQYYGVLF 540
  541 KHLKAKWVNL KGYLRNEVGH LAENPAAHKD TNDRKLRHPF NYRKNVW

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 86.39794
Match: 2qtsA
Description: No description for 2qtsA was found.

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle