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View Structure Prediction Details

Protein: gi|57108776
Organism: Canis lupus familiaris
Length: 158 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|57108776.

Description E-value Query
Range
Subject
Range
gi|149059845, gi... - gi|68163465|ref|NP_001020185.1| transmembrane protein 50B [Rattus norvegicus], gi|60551525|gb|AAH913...
TM50B_MOUSE - Transmembrane protein 50B OS=Mus musculus GN=Tmem50b PE=1 SV=1
1.0E-56 [1..158] [1..158]
gi|50729933 - gi|50729933|ref|XP_416711.1| PREDICTED: similar to C21orf4 [Gallus gallus]
1.0E-56 [1..157] [1..157]
gi|213627808, gi... - gi|89266844|emb|CAJ83988.1| transmembrane protein 50b; C21orf4 [Xenopus tropicalis], gi|62858809|ref...
5.0E-56 [1..158] [1..158]
gi|148229569, gi... - gi|33417077|gb|AAH55980.1| MGC68857 protein [Xenopus laevis], gi|148229569|ref|NP_001079839.1| hypot...
9.0E-56 [1..158] [1..158]
gi|28475307, gi|... - gi|47209347|emb|CAF93322.1| unnamed protein product [Tetraodon nigroviridis], gi|29125851|emb|CAD794...
4.0E-54 [1..157] [1..157]
gi|27882119, gi|... - gi|47087235|ref|NP_998694.1| transmembrane protein 50A [Danio rerio], gi|27882119|gb|AAH44368.1| Tra...
6.0E-52 [1..157] [1..163]
gi|114575620 - gi|114575620|ref|XP_001138153.1| PREDICTED: small membrane protein 1 isoform 4 [Pan troglodytes]
gi|55729330 - gi|55729330|emb|CAH91399.1| hypothetical protein [Pongo abelii]
ENSMMUT000000474... - null, null
gi|197097500 - gi|197097500|ref|NP_001127413.1| transmembrane protein 50A [Pongo abelii]
1.0E-49 [1..157] [1..156]
TMEM50A - transmembrane protein 50A
HGNC:30590|MIM:6... - protein 50A
gi|117644536, gi... - gi|117646700|emb|CAL37465.1| hypothetical protein [synthetic construct], gi|117644784|emb|CAL37858.1...
2.0E-49 [1..157] [1..156]

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Predicted Domain #1
Region A:
Residues: [1-158]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGFLDNFRW PECECIDWSE RRNAVASVVA GILFFTGWWI MIDAAVVYPK PEQLNHAFHT  60
   61 CGVFSTLAFF MINAVSNAQV RGDSYESGCL GRTGARVWLF IGFMLMFGSL IASMWILFGA 120
  121 YVTQNTDVYP GLAVFFQNAL IFFSTLIYKF GRTEELWT

[Run NCBI BLAST on this sequence.]

Detection Method: Pfam
Confidence: 107.744727
Match: PF05255.2
Description: No description for PF05255.2 was found.

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle