YRC Public Data Repository - Protein Structure Prediction

Protein:	gi\|57167145, gi\|...
Organism:	Campylobacter jejuni RM1221
Length:	151 amino acids
Reference:	Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

[What does the above image mean?]

[Show Ginzu Version Information]

Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|57167145, gi|....

Description	E-value	Query Range	Subject Range
gi\|229350205, gi... - gi\|229512695\|ref\|ZP_04402163.1\| biotin carboxyl carrier protein of acetyl-CoA carboxylase [Vibrio ch... gi\|229346649, gi... - gi\|229516223\|ref\|ZP_04405671.1\| biotin carboxyl carrier protein of acetyl-CoA carboxylase [Vibrio ch... gi\|227116705, gi... - gi\|227116705\|ref\|YP_002818601.1\| acetyl-CoA carboxylase, biotin carboxyl carrier protein [Vibrio cho... gi\|229506906, gi... - gi\|229506906\|ref\|ZP_04396414.1\| biotin carboxyl carrier protein of acetyl-CoA carboxylase [Vibrio ch... gi\|229335216, gi... - gi\|229527208\|ref\|ZP_04416601.1\| biotin carboxyl carrier protein of acetyl-CoA carboxylase [Vibrio ch... gi\|229369074, gi... - gi\|229606419\|ref\|YP_002877067.1\| biotin carboxyl carrier protein of acetyl-CoA carboxylase [Vibrio c... gi\|121729646, gi... - gi\|121729646\|ref\|ZP_01682123.1\| acetyl-CoA carboxylase, biotin carboxyl carrier protein [Vibrio chol... gi\|229341869, gi... - gi\|229520984\|ref\|ZP_04410405.1\| biotin carboxyl carrier protein of acetyl-CoA carboxylase [Vibrio ch... gi\|229524744, gi... - gi\|229524744\|ref\|ZP_04414149.1\| biotin carboxyl carrier protein of acetyl-CoA carboxylase [Vibrio ch... gi\|229509279, gi... - gi\|229509279\|ref\|ZP_04398762.1\| biotin carboxyl carrier protein of acetyl-CoA carboxylase [Vibrio ch... gi\|254851431, gi... - gi\|254851431\|ref\|ZP_05240781.1\| acetyl-CoA carboxylase [Vibrio cholerae MO10], gi\|254847136\|gb\|EET25... gi\|9654707, gi\|1... - gi\|9654707\|gb\|AAF93470.1\| acetyl-CoA carboxylase, biotin carboxyl carrier protein [Vibrio cholerae O... gi\|11354377 - pir\|\|G82341 acetyl-CoA carboxylase, biotin carboxyl carrier protein VC0296 [imported] - Vibrio chole... gi\|254286232, gi... - gi\|254286232\|ref\|ZP_04961191.1\| acetyl-CoA carboxylase, biotin carboxyl carrier protein [Vibrio chol... gi\|148873102, gi... - gi\|153831417\|ref\|ZP_01984084.1\| acetyl-CoA carboxylase, biotin carboxyl carrier protein [Vibrio chol... gi\|153827378, gi... - gi\|153827378\|ref\|ZP_01980045.1\| acetyl-CoA carboxylase, biotin carboxyl carrier protein [Vibrio chol... gi\|227080510, gi... - gi\|227080510\|ref\|YP_002809061.1\| acetyl-CoA carboxylase, biotin carboxyl carrier protein [Vibrio cho...	138.0	[0..1]	[149..44]
gi\|83699281 - gi\|83699281\|dbj\|BAE54378.1\| pyruvate carboxylase biotin-containing subunit [Pelotomaculum thermoprop...	134.0	[0..1]	[150..483]
gi\|83573282, gi\|... - gi\|83590368\|ref\|YP_430377.1\| pyruvate carboxylase subunit B [Moorella thermoacetica ATCC 39073], gi\|...	133.0	[0..1]	[150..495]
gi\|75228621 - gi\|75228621\|ref\|ZP_00715246.1\| COG0511: Biotin carboxyl carrier protein [Escherichia coli B7A]	131.0	[0..1]	[149..1]
gi\|53753288, gi\|... - gi\|54293456\|ref\|YP_125871.1\| acetyl-CoA carboxylase biotin carboxyl carrier protein [Legionella pneu...	131.0	[0..1]	[149..1]
gi\|52840708, gi\|... - gi\|52840708\|ref\|YP_094507.1\| acetyl-CoA carboxylase biotin carboxyl carrier protein [Legionella pneu...	131.0	[0..1]	[149..1]
gi\|53750283, gi\|... - gi\|54296498\|ref\|YP_122867.1\| acetyl-CoA carboxylase biotin carboxyl carrier protein [Legionella pneu...	131.0	[0..1]	[149..1]
gi\|83680137, gi\|... - gi\|83680137\|ref\|ZP_00941845.1\| COG0511: Biotin carboxyl carrier protein [Burkholderia pseudomallei 4... gi\|100917384, gi... - gi\|67637768\|ref\|ZP_00436706.1\| COG0511: Biotin carboxyl carrier protein [Burkholderia mallei 10399],... gi\|167904335 - gi\|167904335\|ref\|ZP_02491540.1\| acetyl-CoA carboxylase biotin carboxyl carrier protein subunit [Burk... gi\|67643585, gi\|... - gi\|67643585\|ref\|ZP_00442330.1\| acetyl-CoA carboxylase, biotin carboxyl carrier protein [Burkholderia... gi\|160694696, gi... - gi\|254178782\|ref\|ZP_04885436.1\| acetyl-CoA carboxylase, biotin carboxyl carrier protein [Burkholderi... gi\|126448827, gi... - gi\|67649092\|ref\|ZP_00447318.1\| COG0511: Biotin carboxyl carrier protein [Burkholderia mallei NCTC 10... gi\|126442153, gi... - gi\|67737635\|ref\|ZP_00488384.1\| COG0511: Biotin carboxyl carrier protein [Burkholderia pseudomallei 6... gi\|243065267, gi... - gi\|243065267\|gb\|EES47453.1\| acetyl-CoA carboxylase, biotin carboxyl carrier protein [Burkholderia ma... gi\|52429542, gi\|... - gi\|53726119\|ref\|YP_104047.1\| acetyl-CoA carboxylase biotin carboxyl carrier protein subunit [Burkhol... gi\|121600415, gi... - gi\|84523761\|ref\|ZP_01010897.1\| COG0511: Biotin carboxyl carrier protein [Burkholderia mallei SAVP1],... gi\|85065648 - gi\|85065648\|ref\|ZP_01026501.1\| COG0511: Biotin carboxyl carrier protein [Burkholderia mallei 10229] gi\|87314283, gi\|... - gi\|87314283\|ref\|ZP_01095334.1\| COG0511: Biotin carboxyl carrier protein [Burkholderia mallei 2002721... gi\|217396572, gi... - gi\|217421160\|ref\|ZP_03452665.1\| acetyl-CoA carboxylase, biotin carboxyl carrier protein [Burkholderi... gi\|124292165, gi... - gi\|124384145\|ref\|YP_001027265.1\| acetyl-CoA carboxylase biotin carboxyl carrier protein subunit [Bur... gi\|83621123, gi\|... - gi\|83621123\|ref\|ZP_00931535.1\| COG0511: Biotin carboxyl carrier protein [Burkholderia mallei FMH], g... gi\|83625656, gi\|... - gi\|83625656\|ref\|ZP_00935886.1\| COG0511: Biotin carboxyl carrier protein [Burkholderia mallei JHU], g...	131.0	[0..1]	[148..1]
gi\|134248151, gi... - gi\|134280144\|ref\|ZP_01766855.1\| acetyl-CoA carboxylase, biotin carboxyl carrier protein [Burkholderi... gi\|67755814, gi\|... - gi\|67755814\|ref\|ZP_00494704.1\| COG0511: Biotin carboxyl carrier protein [Burkholderia pseudomallei P... gi\|169656859, gi... - gi\|67761800\|ref\|ZP_00500506.1\| COG0511: Biotin carboxyl carrier protein [Burkholderia pseudomallei S... gi\|226196846, gi... - gi\|226196846\|ref\|ZP_03792425.1\| acetyl-CoA carboxylase, biotin carboxyl carrier protein [Burkholderi... gi\|194505246, gi... - gi\|99912776\|ref\|ZP_01319474.1\| hypothetical protein Bpse1_03001040 [Burkholderia pseudomallei 1655],... gi\|67684734, gi\|... - gi\|90293344\|ref\|ZP_01212946.1\| hypothetical protein Bpse17_02001994 [Burkholderia pseudomallei 1710a... gi\|167895949 - gi\|167895949\|ref\|ZP_02483351.1\| acetyl-CoA carboxylase biotin carboxyl carrier protein subunit [Burk... gi\|167920547 - gi\|167920547\|ref\|ZP_02507638.1\| acetyl-CoA carboxylase biotin carboxyl carrier protein subunit [Burk... gi\|76579432, gi\|... - gi\|76809979\|ref\|YP_334871.1\| acetyl-CoA carboxylase biotin carboxyl carrier protein subunit [Burkhol... gi\|167740254 - gi\|167740254\|ref\|ZP_02413028.1\| acetyl-CoA carboxylase biotin carboxyl carrier protein subunit [Burk... gi\|167825878 - gi\|167825878\|ref\|ZP_02457349.1\| acetyl-CoA carboxylase biotin carboxyl carrier protein subunit [Burk... gi\|82531119, gi\|... - gi\|82531119\|ref\|ZP_00890341.1\| COG0511: Biotin carboxyl carrier protein [Burkholderia pseudomallei 1... gi\|161360611, gi... - gi\|90661841\|ref\|ZP_01249679.1\| hypothetical protein Bpse110_02006407 [Burkholderia pseudomallei 1106... gi\|52211005, gi\|... - gi\|53720591\|ref\|YP_109577.1\| acetyl-CoA carboxylase biotin carboxyl carrier protein subunit [Burkhol...	131.0	[0..1]	[148..1]
gi\|115350561, gi... - gi\|74019754\|ref\|ZP_00690367.1\| Acetyl-CoA biotin carboxyl carrier [Burkholderia ambifaria AMMD], gi\|...	131.0	[0..1]	[148..1]

Back

Predicted Domain #1

Region A:
Residues: [1-151]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKEEIKELV NLFAEANISK IKIKEQDGFE IELERDMCCD VPAPVCPPVP APQPINVSVV  60
   61 NEAQPSQSVK SNKPSINSPM VGTFYQAPSP GAAPFVKVGS TVKKGDTIAI IEAMKIMNEI 120
  121 EAEFDCRIAE ILVADGQPVE FGMPLFAVEK L

[Run NCBI BLAST on this sequence.]

Detection Method:	PSI-BLAST
Confidence:	19.522879
Match:	2qf7A
Description:	No description for 2qf7A was found.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

View Structure Prediction Details

Top Sequence Alignment Hits