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View Structure Prediction Details

Protein: gi|191166384, gi...
Organism: Escherichia coli B7A
Length: 264 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|191166384, gi....

Description E-value Query
Range
Subject
Range
gi|9257170 - gi|9257170|pdb|4MAT|A Chain A, E.Coli Methionine Aminopeptidase His79ala Mutant
309.0 [0..1] [264..1]
gi|74310788, gi|... - gi|74310788|ref|YP_309207.1| methionine aminopeptidase [Shigella sonnei Ss046], gi|73854265|gb|AAZ86...
309.0 [0..1] [264..1]
gi|75512180, gi|... - gi|75512180|ref|ZP_00734752.1| COG0024: Methionine aminopeptidase [Escherichia coli 53638], gi|18849...
306.0 [0..1] [264..1]
gi|83635961, gi|... - gi|83647918|ref|YP_436353.1| methionine aminopeptidase, type I [Hahella chejuensis KCTC 2396], gi|83...
303.0 [0..1] [254..1]

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Predicted Domain #1
Region A:
Residues: [1-264]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAISIKTPED IEKMRVAGRL AAEVLEMIEP YVKPGVSTGE LDRICNDYIV NEQHAVSACL  60
   61 GYHGYPKSVC ISINEVVCHG IPDDAKLLKD GDIVNIDVTV IKDGFHGDTS KMFIVGKPTI 120
  121 MGERLCRITQ ESLYLALRMV KPGINLREIG AAIQKFVEAE GFSVVREYCG HGIGRGFHEE 180
  181 PQVLHYDSRE TNVVLKPGMT FTIEPMVNAG KKEIRTMKDG WTVKTKDRSL SAQYEHTIVV 240
  241 TDNGCEILTL RKDDTIPAII SHDE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 84.39794
Match: 4matA
Description: Methionine aminopeptidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
peptidase activity 0.71486512278733 bayes_pls_golite062009
catalytic activity 0.51899181055614 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 0.41611107366763 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle