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View Structure Prediction Details

Protein: cdc-37
Organism: Caenorhabditis elegans
Length: 403 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for cdc-37.

Description E-value Query
Range
Subject
Range
gi|76647955 - gi|76647955|ref|XP_584975.2| PREDICTED: similar to CDC42-binding protein kinase beta [Bos taurus]
171.0 [0..26] [386..758]

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Predicted Domain #1
Region A:
Residues: [1-278]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEIWKFCVKK KGNTVISRVF KRDSECEEEK FSKMPIDYSK WKDIEVSDDE DDTHPNIDTP  60
   61 SLFRWRHQAR LERMAEKKME QEKIDKEKGT TSKKMEELEK KLAAADVTDK SDIQKQIDEV 120
  121 KAQEEAWRKK EAELEEKERL EPWNVDTIGH EAFSTSRINK ITEKKPQAPK TDEEDTHAMS 180
  181 TFFETHESLL EKMAVLKNGA KSTELFLAEH PHMASEYTAN WLTIEALNAA IDFNEEKMKT 240
  241 MAEQCIIIQY LLELSKSLNA VATNTTVQKQ FFKKFEAA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.154902
Match: 2tmaA
Description: Tropomyosin
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [279-403]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EPVYMKHYQD EVKAFEDRLR TRAQTKRDAA MEEAEAEEKA ERMKSAPGGI DPQEVFEQLP  60
   61 EEMRKCFEAH DIEALKGVAQ KMDEEVFKYH FDRCIASGLW VPGKADDDDD DEEAAPAEEE 120
  121 PTTSS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 21.30103
Match: 1us7B
Description: Complex of Hsp90 and P50
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle