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View Structure Prediction Details

Protein: Dyb-PD
Organism: Drosophila melanogaster
Length: 646 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Dyb-PD.

Description E-value Query
Range
Subject
Range
DTNB_RAT - Dystrobrevin beta OS=Rattus norvegicus GN=Dtnb PE=1 SV=2
518.0 [0..3] [599..12]

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Predicted Domain #1
Region A:
Residues: [1-227]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELEPRVAIL QDLRLQTFDS IRFASYRTAS KLRYIQKSTN LHLVDIWNVI EAFRENGLNT  60
   61 LEPQSEVSVA RLETLVSSLY HNLNKRLPTA QQVPVDSKAG LLLNWLLAAY TSDNSGKIRV 120
  121 FSIKVALATM CSGKLVDKLR YIFSQISDGA GQLVAWKLGE FLREVLALPA AVYESPTFHY 180
  181 KEGLEEEIFP AENKVTVNDF MATLMSEPGP SCLVWLPLVH RLATVET

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 93.0
Match: 1eg3A
Description: Dystrophin
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [228-273]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 IVHPTVCSVC HKENFTGFRY RCQRCHAYQL CQECFWHGKT SLNHQN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 18.09691
Match: 2e5rA
Description: No description for 2e5rA was found.

Predicted Domain #3
Region A:
Residues: [274-584]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DHEVKEYSSY KSPSKQIGHS LRKSFRCVPE KTVQVLPRFP DQPEKTLNLS HIVPPSPLPS  60
   61 HNGFSDPSGL VHGHHGPHPG LPGQHGLFDR SSTLDSRATG RSLDSASGTA GTTMSRVAAA 120
  121 SANDEEHRLI ARYAARLAQE NRAPSNLPDN ATPIGTDNSR AQRELIAQLE SKNKEIMREI 180
  181 ARLRRQQETE QMAPENPALI NELRALRQRK GELEGHLGAL QDSRRQLMEQ LEGLMRMLKN 240
  241 QQTASPRSTP NSSPRSGKSP PMPGGAGILG TSPMSALHAQ QMQQHPMAGG VRASQQQLLQ 300
  301 QQQQQAHGHG P

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 8.0
Match: 2dfsA
Description: No description for 2dfsA was found.

Predicted Domain #4
Region A:
Residues: [585-646]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 FSQSQLEQLN QISSDMRSAF AANGSANFDE SQSYNQEWNE KANANSQWQE QFAQWSLNSQ  60
   61 KN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.154902
Match: 1c1gA
Description: Tropomyosin
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle